DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mus101 and pbl

DIOPT Version :10

Sequence 1:NP_524909.1 Gene:mus101 / 48309 FlyBaseID:FBgn0002878 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_523965.2 Gene:pbl / 38879 FlyBaseID:FBgn0003041 Length:1311 Species:Drosophila melanogaster


Alignment Length:1512 Identity:294/1512 - (19%)
Similarity:468/1512 - (30%) Gaps:538/1512 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSISMSMDETICAYFVNNLKPGDGGV-QEADTLQQFEAARELLGQQLAETQIRQIKPSEGYPLIA 64
            |||: ::...||..         ||| |:|||||..|                    |.|.|::.
  Fly    14 MSIT-TLPTRICLV---------GGVGQDADTLQAAE--------------------SFGLPIVT 48

  Fly    65 AGNLTKKDV----------FVLTQFEGEFFEQLQQTRALILGPPCLITCLRRNEPIPEGSSAIYS 119
            :.  |..|:          :||..|||..||.:.:.:..|||||.|.......:.:.:.|..||:
  Fly    49 SD--TGLDILGESSDWRTFYVLDDFEGASFEAIHKQKECILGPPALKYAAEMKQTLGQNSRPIYN 111

  Fly   120 TAMRDLQVSATGITPQKKEELSRLINW---MGGIYFQSFGHRTTHLISNTIKSSKYEQATLNGVP 181
            .|||.:....|||  :||:||::|:|.   |||...:....:|||||.|.....||:.|....:.
  Fly   112 YAMRGVVTCFTGI--RKKDELTKLVNLIHSMGGCIKKDLNTKTTHLICNHSGGEKYQYAKTFRLT 174

  Fly   182 VMHVDWVQYVWDQSRRSQREGIMATDPDFDK-YRLPIFFGANITCSGLDVARKDQVMRLVNDNGG 245
            |:...||...|  :.|:..| ..||..:|.| :||..|.|..|...|..|.....::.::.:|||
  Fly   175 VVRPAWVFAAW--ADRNSLE-FDATQENFTKTHRLKAFEGQKICFFGFPVEEHQHMVDVLLENGG 236

  Fly   246 IYHRAFRSQVVDIVI--------TEQTKTDT---------------------------------- 268
            :.......:...:|:        :..|.|||                                  
  Fly   237 VCAELDDPECSHVVMPNTGAVFTSTSTSTDTNPSTLINPPESQVPGSSSASQAGEEEQRKAEHLE 301

  Fly   269 -------------------------EKYKAAIRYKKDVLLPEWIF----DSCNRGY-ALP----- 298
                                     :|....|..:.|:...|.:|    |..|.|. .||     
  Fly   302 QAEIKKMEYSHAETDNGMSLDIDQEQKENQGIEDEDDIHFDERLFVEAADIINHGEDQLPESDEE 366

  Fly   299 -------------TKDYEVRPGKTSSTP--------TKTTRPGAAPGADQTHLSDLSRISFVSGS 342
                         .|:.||.....:|||        .|...|.::|..|...|      .|.|.:
  Fly   367 DLEEEQKPKVEEVLKEQEVEEDVQASTPKTSKIRTSLKAATPLSSPEMDGIAL------DFESTT 425

  Fly   343 RRMCSDLSTVNESVSSVGSSSPAKQLLKQATSSGRNYQQVLAEIEPRQAKKAGAFLDGCCVYLSG 407
            :.:...|..::|.........|::..||                     :|..:|.:...:.:..
  Fly   426 QNISPILKAIDECDLETDDLPPSENDLK---------------------RKRESFDNVSLMSVDS 469

  Fly   408 FRSEEREKLNRVLNTGGATRYDEANEGISHIIVGQLDDAEYRQWQRDGLMGSVHVVRLDWLLESI 472
            |......|..:::.||..:|                           .|..||..| .:.|::::
  Fly   470 FALPASTKKPKLIRTGSISR---------------------------TLRRSVSFV-AEPLMKTL 506

  Fly   473 RAGRVVSELVHRVSMPQNREPD--VASPASKRTLRSMNHSFKQPTLPIKKKL--FDQEPDPVQEQ 533
            |..|  |.:....|...:...|  :.|.||...| ::|.|.::   |:|:||  |.........:
  Fly   507 RPRR--SSVADASSFVGSEAADNSICSLASSINL-TLNDSIRK---PVKEKLRSFCGRITRSSSR 565

  Fly   534 EHEE-----PDHTLLDQYSQDQGAVAQLPPADVSLLQPAASSTQM----DIRQRVSVANPKPPAE 589
            .|:.     |:.|.|    .|.|......|...|...|..:....    .:...:::.||..|..
  Fly   566 RHDRGVDGTPECTTL----LDSGFKTPKAPKLRSTATPKTAKRLFGPVSGVVSALTLTNPSTPTP 626

  Fly   590 GLQLPDLSASTLSIDFDKLDYFAGVSVYVHRECFNEEFFNQMLTECEAAQGLLVPSSFSDEVDFA 654
            .........:||.::...:..||                     .|.||....:|.|.|......
  Fly   627 NPNPNTNCTATLDVNDTSIHTFA---------------------FCAAAVTPAMPPSSSSSSSSP 670

  Fly   655 IVSFEVAFDVKQLPVKARHVVTELFLESCMKKNQLLPIEYYHKHVPATALRQPLKGMTIVVSIYA 719
            |:|..:|.......:|:..       ||..::|...|||            :|   |.:||.   
  Fly   671 ILSTSIAVHSSVQVIKSPE-------ESTTRRNSPAPIE------------EP---MAMVVD--- 710

  Fly   720 GLERDFINATAELLGASVNKTFIKKEKPLLVCPSAEGSKYEGAIKWNYP-VVTSDWLVQCARTGQ 783
                              ..|.:.|.:|                |.|:. ::.|||.....:.|.
  Fly   711 ------------------EHTTLTKPEP----------------KNNHTHILKSDWFWYTIQNGY 741

  Fly   784 KLPFVGYLVGKSPEDFPISPRL--RDS-----NSRTARRPNESTLVAQPDVTMEEAENQPAGSVT 841
            ... :.||.|...:....:|..  |||     |.|..:|.::..          :.|..|.||  
  Fly   742 ANE-MDYLFGDYLDSITNTPNTDRRDSLPISFNKRKRKRFSQRI----------QLEGTPLGS-- 793

  Fly   842 PVTAGSPGAPELTPLRNKRVSELAGIPGGSALHRGSNS----TSSPD--------------SPCT 888
                            .||.|.::    .:.|...|||    |:|||              |..|
  Fly   794 ----------------GKRRSSVS----DAGLLSVSNSLFDCTTSPDKLESDKLLHAEPEASDAT 838

  Fly   889 PLSQVGAQQYNLDFL---EQFVQRLDTEEGKDCVREIIREMRENQTPELERIRRQACTPVSRKHQ 950
            |..:.....:.:||.   ..:|..|||.  .:..:..:.|:.|...|.|.:...:..        
  Fly   839 PAKKSMRFNHFMDFYTTESNYVGILDTI--LNLFKNKLEELAETNDPLLNKSEIKTI-------- 893

  Fly   951 RPAPGIPDFCLTPEFQQRMADDFER---RWRLPTMKIKPDTPLAVIRQRVMRITCETLGIEYEES 1012
                 ..:|....|..|.|.:...:   .||                               |:.
  Fly   894 -----FGNFLPIHEVHQSMLEHLRKLHANWR-------------------------------EDC 922

  Fly  1013 NAKTPTLSESPSTVKKKPPTRTTQATKLNFDRSPKTPKLSLGKKTP-----LRVSMGSP---RSG 1069
            ......:......:|..||       .:||....|.......::.|     |:::...|   |.|
  Fly   923 LIGDIIIQHRDELIKAYPP-------YVNFFEQMKEQLQYCDREYPRFHAFLKINQTKPECGRQG 980

  Fly  1070 TQSPFVPNTQSPIEAAPPRRSDGPTLSEEGQSTI--NFDKISFEESAVPVLAPDVPTVAPDVKQI 1132
            .|...:    .|::..|   |....|::..:.|.  |.|....||:            ...:||:
  Fly   981 LQDLMI----RPVQRLP---SISLLLNDILKHTTSGNADHGRLEEA------------LKAIKQV 1026

  Fly  1133 TDYLKNCESRRNSLKRSHD--NDMD-CGESEVQYVQPFESEGFALGTEDMVDWRDPAEFNAAKRR 1194
            |.::...:.|..|.....|  ||:: |                            ||...::.| 
  Fly  1027 TLHINEDKRRTESRMAIFDIFNDIEGC----------------------------PAHLVSSNR- 1062

  Fly  1195 SSGGSPKMQYAGIPCFSISCGDDDEKRAELIARITQLGGKVCENLVNYDDSCTHLLCERPNRG-- 1257
                          .|.:.|        |:......|.|: .::||.|..|.:..||:|.::|  
  Fly  1063 --------------SFILKC--------EVNELSDSLSGR-GDSLVLYLFSDSIELCKRRSKGFN 1104

  Fly  1258 ----------EKMLACIAAGKWILNIQYIEQSHA-----RGDFLDETLYEWGNPKAINLPTLAPE 1307
                      .|.|..|:.....|.|...:...|     |||  .|.||.:         |::.|
  Fly  1105 TAKSPSTAKTHKHLKLISLNTIRLVIDISDSPRAFGLLLRGD--KEKLYTF---------TISDE 1158

  Fly  1308 EEPIAAAVHRWRTELSA 1324
            |...:..|.:...:::|
  Fly  1159 ETDKSVYVKKLCNQIAA 1175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus101NP_524909.1 BRCT 127..189 CDD:349339 23/64 (36%)
BRCT_TopBP1_rpt2_like 216..294 CDD:349363 20/148 (14%)
BRCT_TopBP1_rpt3 392..476 CDD:349350 13/83 (16%)
BRCT 707..786 CDD:469589 13/79 (16%)
BRCT_TopBP1_rpt7 1208..1283 CDD:349370 19/91 (21%)
BRCT 1334..1414 CDD:469589
pblNP_523965.2 BRCT 114..189 CDD:469589 27/78 (35%)
BRCT 209..>250 CDD:469589 8/40 (20%)
BRCT <708..745 CDD:469589 11/74 (15%)
RhoGEF 852..1031 CDD:459876 40/250 (16%)
PH_Ect2 1023..1186 CDD:269936 42/216 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.