DRSC/TRiP Functional Genomics Resources

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Protein Alignment NKX6-1 and E5

DIOPT Version :10

Sequence 1:NP_006159.2 Gene:NKX6-1 / 4825 HGNCID:7839 Length:367 Species:Homo sapiens
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:453 Identity:112/453 - (24%)
Similarity:144/453 - (31%) Gaps:161/453 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    41 PPLPAGP--PSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSL-----------------GSP 86
            |..|..|  .||||.::||:|.|...........||.....:.|:                 ..|
  Fly    13 PMAPTSPFVSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDSIVGESSTRSAPLRVSVISSPP 77

Human    87 PQQLSAATPHGINDILSRPSMPVASGAALP--------------SASPSGSSSSSSSSASASSAS 137
            |:..|.|:|...|:          ||...|              |.||..|..|.|.|...:..:
  Fly    78 PRSESPASPTNTNN----------SGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGGN 132

Human   138 AAAAAAAAAAAAASS----PAGLLAGLP--------------------RFSSLSPPP--PPPGLY 176
            .|||...|.:...||    |..|:..||                    |.:....||  |||.|.
  Fly   133 PAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLA 197

Human   177 FSPSAAAVAA------------------VGRYPKPLAEL-PGRTPI-FWPG---VMQSPPWRDAR 218
            .....||..|                  .|....|...| ||:.|: .:||   ....||.....
  Fly   198 AQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHP 262

Human   219 LACTPH-----------------------QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKY 260
            ....||                       .|:.|.....|.|..|..||..|:..||..||...|
  Fly   263 FGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHY 327

Human   261 LAGPERARLAYSLGMTESQVKVWFQNRRTKWRK-------------------------------K 294
            :.|.||.:||..|.:||:||||||||||||.::                               |
  Fly   328 VVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAK 392

Human   295 HAAEMATAKKKQDSETERLKGASENEEED-------DDYNKPLDPNSDD---EKITQLLKKHK 347
            |.....:.:..:|.|.|     .|.||:|       |||...:|.....   |:..|.|.:|:
  Fly   393 HDGSQHSYEDAEDPEDE-----DEIEEDDEDEVIDMDDYGSEMDAEEHQRLREQFQQQLAQHQ 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKX6-1NP_006159.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..133 30/124 (24%)
Repressor domain. /evidence=ECO:0000250 102..268 58/251 (23%)
Homeodomain 235..293 CDD:459649 31/57 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..367 17/64 (27%)
Involved in DNA-binding. /evidence=ECO:0000250 306..367 15/52 (29%)
E5NP_524825.1 Homeodomain 304..360 CDD:459649 30/55 (55%)

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