DRSC/TRiP Functional Genomics Resources

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Protein Alignment NKX6-1 and Ubx

DIOPT Version :10

Sequence 1:NP_006159.2 Gene:NKX6-1 / 4825 HGNCID:7839 Length:367 Species:Homo sapiens
Sequence 2:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster


Alignment Length:281 Identity:71/281 - (25%)
Similarity:107/281 - (38%) Gaps:74/281 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    70 GGLKPPATGGLSSLGSPPQQLSAATPH----GINDILSRPSMPVASGAALPSASPSGSSSSS--- 127
            ||....|.|..:..|..|.:.||.||.    |..|......:....|:|..:.|.||.:.::   
  Fly   135 GGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGV 199

Human   128 ------SSSASASSASAAAAAAAAAAAAASS----------PAGLLAGLPRFSSLSPPPPPPGLY 176
                  :.:.:|.:|:...:.|||..|||||          |...:||       ..|..|....
  Fly   200 QSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAG-------ECPEDPTKSK 257

Human   177 FSPSAAAVAAVG-----RYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSIL---LDKD 233
            ..........:.     ||.:.||                              ||:|   |..:
  Fly   258 IRSDLTQYGGISTDMGKRYSESLA------------------------------GSLLPDWLGTN 292

Human   234 GKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAE 298
            |.|:..|.|::..|...|||.|....||....|..:|::|.:||.|:|:||||||.|.:|    |
  Fly   293 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK----E 353

Human   299 MATAKK--KQDSETERLKGAS 317
            :...|:  :|:.:.:..|.|:
  Fly   354 IQAIKELNEQEKQAQAQKAAA 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKX6-1NP_006159.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..133 17/75 (23%)
Repressor domain. /evidence=ECO:0000250 102..268 40/192 (21%)
Homeodomain 235..293 CDD:459649 24/57 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..367 5/26 (19%)
Involved in DNA-binding. /evidence=ECO:0000250 306..367 3/12 (25%)
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 23/55 (42%)

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