DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNaseII and nuc-1

DIOPT Version :9

Sequence 1:NP_650672.1 Gene:DNaseII / 48228 FlyBaseID:FBgn0000477 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_509604.1 Gene:nuc-1 / 181174 WormBaseID:WBGene00003828 Length:375 Species:Caenorhabditis elegans


Alignment Length:398 Identity:129/398 - (32%)
Similarity:183/398 - (45%) Gaps:69/398 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCFVLLFVWFFYQNEAKSKVSCKDEAGNDVDWWHLYKLPKHYQHNDLGKDTSGLKYLYVTSQNYD 68
            |.|:||.|     ::..:..||||::||||||:.:||:|.......:.....|:.:.||......
 Worm     9 LIFLLLGV-----SQTYAAFSCKDQSGNDVDWFAVYKMPIEKDDGSVTGLAGGVAWYYVDVNKKG 68

  Fly    69 TWQMSGKFISDPLSLPAQTLNPLNDDPSHTLL--AAYNDQQPNGTVFSSG--------------- 116
            |...|.|.:.|.....|.||....|..:...:  ..||| :|.|:..:||               
 Worm    69 TLTPSAKTLDDNDQAIAYTLQQYYDKQNDKTIFHVMYND-EPWGSKSTSGIKLEEILSNRVYSNY 132

  Fly   117 -----------GHAKGVVASDGETAIWIVHSVPKFPTIPDYSYPTSGEQYAQSMLCVTLKGEDLE 170
                       ||.||.:..||.:.:|:|||||.||....|.||.||..|.|:|||:|.|...|:
 Worm   133 THEDDSTSTAFGHTKGTIFFDGTSGVWLVHSVPLFPNPTKYEYPVSGHDYGQTMLCMTFKYAQLK 197

  Fly   171 KVGQILVYNEPHFYYQRNPLATRSDELFPSLERALHGQWRTESPFQKDLEVRSLDGKKFRLFGKS 235
            .:|..|.:|.|:.|....|....:|.  ..|.:|:.||::...|||..:|:.::.|..|..|.||
 Worm   198 SIGTQLFFNRPNIYSSNLPTNMAADN--ADLAKAIAGQYQKGQPFQSVIELETMAGYSFTNFAKS 260

  Fly   236 GRANVELYADVVAPTLDVSLFVEAWRDGAGNLPNSCDKSDKVLNVESISNPELSVD------FKT 294
            ...|.:||..:|||||...|.||.||.|: .:|..|       .:...:|..||:.      |..
 Worm   261 KEFNADLYDTLVAPTLKTDLVVETWRRGS-EIPLDC-------KLTYHANDALSIHVGSTTAFSY 317

  Fly   295 TQDHSKWA----VSRPTGILIYHWRVGGGDWICVGDINRQEGQLHRGGGTVCHKSARVSNLYRQL 355
            |:||||.|    :::|              |:|:|||||...|..|||||.|..|:.:...|..:
 Worm   318 TKDHSKMAHSADMTKP--------------WVCIGDINRMTSQYVRGGGTTCISSSFLWKAYSVI 368

  Fly   356 VTNYDKCA 363
            .|. :.||
 Worm   369 ATQ-NNCA 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNaseIINP_650672.1 PLDc_DNaseII_1 21..164 CDD:197219 55/170 (32%)
DNase_II 24..360 CDD:281283 122/373 (33%)
PLDc_DNaseII_2 213..362 CDD:197220 53/158 (34%)
nuc-1NP_509604.1 PLDc_DNaseII_1 21..191 CDD:197219 55/170 (32%)
DNase_II 24..371 CDD:281283 121/371 (33%)
PLDc_DNaseII_2 238..374 CDD:197220 53/158 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162431
Domainoid 1 1.000 190 1.000 Domainoid score I1927
eggNOG 1 0.900 - - E1_KOG3825
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1052
Inparanoid 1 1.050 191 1.000 Inparanoid score I2557
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54389
OrthoDB 1 1.010 - - D422272at33208
OrthoFinder 1 1.000 - - FOG0002558
OrthoInspector 1 1.000 - - otm14184
orthoMCL 1 0.900 - - OOG6_104320
Panther 1 1.100 - - O PTHR10858
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2694
SonicParanoid 1 1.000 - - X1683
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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