DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNaseII and Dnase2

DIOPT Version :9

Sequence 1:NP_650672.1 Gene:DNaseII / 48228 FlyBaseID:FBgn0000477 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_612548.1 Gene:Dnase2 / 171575 RGDID:621457 Length:350 Species:Rattus norvegicus


Alignment Length:348 Identity:117/348 - (33%)
Similarity:166/348 - (47%) Gaps:25/348 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VSCKDEAGNDVDWWHLYKLPKHYQHNDLGKDTSGLKYLYVTSQNYDTWQMSGKFISDPLSLPAQT 87
            :||..::|..|||:.:||||.:....|  |...||.|.|: .||.:.||.....|.........|
  Rat    20 LSCYGDSGRPVDWFVVYKLPANSGSGD--KPWKGLMYKYM-DQNSEGWQDGVGHIDSKDGAVGLT 81

  Fly    88 LNPL-NDDPSHTLLAAYNDQQPNGTV---FSSGGHAKGVVASDGETAIWIVHSVPKFPTIPD--- 145
            |.|| ..:.|......||||.|..:.   .||.||.|||:..|.|...|:|||||:||:...   
  Rat    82 LQPLYQKNSSQLAFLLYNDQPPKSSSAQDSSSRGHTKGVLLLDQEGGFWLVHSVPRFPSPASSGA 146

  Fly   146 YSYPTSGEQYAQSMLCVTLKGEDLEKVGQILVYNEPHFYYQRNPLATRSDELFPSLERALHGQWR 210
            ||:|.:...|.|::|||:|.......:|:.|.|..|..|..:  |.....:..|.||....|...
  Rat   147 YSWPPNARTYGQTLLCVSLPFSQFPGIGKQLTYTYPLVYDHK--LEGIFAQKLPDLEEVTKGHHV 209

  Fly   211 TESPFQKDLEVRSLDGKKFRLFGKSGRANVELYADVVAPTLDVSLFVEAWRDGAGNLPNSCDKSD 275
            ...|:...:.:.|..|..|:.|.|.|:...:||:..:|..|..:|.|:.|.:..|.||::|..:.
  Rat   210 LREPWNSSVILTSRAGTTFQSFAKFGKFGDDLYSGWLAAALGTNLQVQFWPNSPGILPSNCSGTH 274

  Fly   276 KVLNVESISNPELS-VDFKTTQDHSKWAVSRPTGILIYHWRVGGGDWICVGDINRQEGQLHRGGG 339
            |:|:|.....|..| ..|..|:|||||.|:..            |.|:||||:||.:.:.|||||
  Rat   275 KILDVTETGFPGPSGPTFNATEDHSKWCVAPE------------GPWVCVGDMNRNKRETHRGGG 327

  Fly   340 TVCHKSARVSNLYRQLVTNYDKC 362
            |:|.:...:...:|.||.....|
  Rat   328 TLCTQVPALWKAFRSLVKACKPC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNaseIINP_650672.1 PLDc_DNaseII_1 21..164 CDD:197219 56/147 (38%)
DNase_II 24..360 CDD:281283 116/343 (34%)
PLDc_DNaseII_2 213..362 CDD:197220 49/149 (33%)
Dnase2NP_612548.1 PLDc_SF 19..179 CDD:301585 59/161 (37%)
DNase_II 21..345 CDD:281283 115/340 (34%)
PLDc_SF 212..350 CDD:301585 49/149 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345738
Domainoid 1 1.000 182 1.000 Domainoid score I3374
eggNOG 1 0.900 - - E1_KOG3825
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I3870
OMA 1 1.010 - - QHG54389
OrthoDB 1 1.010 - - D422272at33208
OrthoFinder 1 1.000 - - FOG0002558
OrthoInspector 1 1.000 - - otm45732
orthoMCL 1 0.900 - - OOG6_104320
Panther 1 1.100 - - LDO PTHR10858
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1683
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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