Sequence 1: | NP_002499.2 | Gene: | NID1 / 4811 | HGNCID: | 7821 | Length: | 1247 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001256465.1 | Gene: | nid-1 / 179770 | WormBaseID: | WBGene00003738 | Length: | 1584 | Species: | Caenorhabditis elegans |
Alignment Length: | 1682 | Identity: | 396/1682 - (23%) |
---|---|---|---|
Similarity: | 610/1682 - (36%) | Gaps: | 565/1682 - (33%) |
- Green bases have known domain annotations that are detailed below.
Human 16 LLLPLLLAGPVGCLSRQELFPFGPGQGDLELEDGDDFVSPALELSGALRFYDRSDIDAVYVTTNG 80
Human 81 IIATSEPPAKESHPGLFPPTFGAVAPFLADLDTTDGLGKVYYR-----EDLSPSITQRAAECVHR 140
Human 141 GFPE-ISFQPSSAVVVTWESV--APYQGPSRDPDQKGKRNTFQAVLASSDSSSYAIFLYPEDGLQ 202
Human 203 FHTTFSKKENNQVPAVVAFSQGSVGFLWKSNGAYNIFANDRESVENLAKSSNSGQQGV------- 260
Human 261 -------WVFEIGSPATTNGVVPADVILGTEDGAEYDDEDEDY------DLATTRLGLEDVGTTP 312
Human 313 FSYKALR--RGGADTYSVPSVLSPRRAATERPLGP--PTERTRSFQLAV---------------- 357
Human 358 ------ETFHQQHPQVIDVDEVEETGVVFSYNTDSRQTCA-NNRHQCSVHAECRDYATGFCCSCV 415
Human 416 AGYTGNGRQCVAEGSPQRVNGKVKGRIFVGSSQVPIVFENTDLHSYVVMNHGRSYTAISTIPETV 480
Human 481 GYSLLPLAPVGGIIGWMFA-VEQDGFKNGFSITGGEFTRQAEVTFVGHPGNLVIKQRFSGIDEHG 544
Human 545 HLTIDTELEGRVPQIPFGSSVHIEPYTELY-HYSTSVITSSSTREYTVTEPERDGASPSRIYTYQ 608
Human 609 WR--QTITFQECVHDD-SRPALPSTQQLSVDSVFVLYNQEEKILRYALSN----SIGPV------ 660
Human 661 ------REGSPD-ALQNPCYI--GTHGCDTNAACRPGPRTQFT--------------CECSIGFR 702
Human 703 GD-------GRTCYDIDECSEQPSVCGSHTICNNHPGTFRCECVEGYQ----------------- 743
Human 744 ------------FSDEGTCVA-----------VVDQRP--------------INYC---ETGL-- 766
Human 767 HNCDIPQR--------------------------------------------------------- 774
Human 775 ----------------------------------------------------------------- 774
Human 775 -----AQCIY---TGGSSYTCSCLPGFSGDGQACQ-----------------------DVDECQP 808
Human 809 SRCHPDAFC----YNTPGSFTCQCKPGYQGDGFRCVPGE------------VEKTRCQHEREHIL 857
Human 858 GAAGA---------------------TDPQRPIPPGLFVPECDAHGH------------------ 883
Human 884 ---------YAP--------------TQC--HGSTGYCWCVDRDGREVEG-TRTRPGMTPPCLST 922
Human 923 VAPPIHQGPAV-PTA------------------------------------VIPLPPGTHLLFAQ 950
Human 951 TG--------------KIERLPL-------EGNTMRKTEAKAFLHVPAKVIIGLAFDCVDKMVYW 994
Human 995 TDITEPSIGRASLHGGEPTTIIRQDLGSPEGIAVDHLGRNIFWTDSNLDRIEVAKLDGTQRRVLF 1059
Human 1060 ETDLVNPRGIVTDSVRGNLYWTDWNRDNPKIETSYMDGTNRRILVQDDLGLPNGLTFDAFSSQLC 1124
Human 1125 WVDAGTNRAECLNPSQPSRRKALEGLQYPFAVT-SYGKNLYFTDWKMNSVVALDLAISKETDAFQ 1188
Human 1189 PH--KQTRLYGITTALSQCPQGHNYCSVNNGGCTHLCLATPGSRTCRCPDNTLGVDC 1243 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NID1 | NP_002499.2 | NIDO | 106..269 | CDD:214712 | 37/184 (20%) |
EGF_3 | 390..425 | CDD:289699 | 13/35 (37%) | ||
nidG2 | 429..660 | CDD:238158 | 78/239 (33%) | ||
EGF_3 | 672..708 | CDD:289699 | 13/58 (22%) | ||
Cell attachment site | 702..704 | 0/1 (0%) | |||
EGF_CA | 710..751 | CDD:214542 | 18/69 (26%) | ||
EGF_3 | 762..800 | CDD:289699 | 18/172 (10%) | ||
EGF_3 | 811..839 | CDD:289699 | 11/31 (35%) | ||
Thyroglobulin_1 | 849..919 | CDD:278514 | 21/134 (16%) | ||
LDL-receptor class B 1 | 990..1032 | 17/41 (41%) | |||
Ldl_recept_b | 992..1029 | CDD:278487 | 15/36 (42%) | ||
LY | 1014..1055 | CDD:214531 | 19/40 (48%) | ||
LDL-receptor class B 2 | 1033..1075 | 18/41 (44%) | |||
LY | 1056..1100 | CDD:214531 | 19/43 (44%) | ||
LDL-receptor class B 3 | 1076..1120 | 20/43 (47%) | |||
LY | 1101..1137 | CDD:214531 | 17/35 (49%) | ||
LDL-receptor class B 4 | 1121..1162 | 17/41 (41%) | |||
FXa_inhibition | 1212..>1236 | CDD:291342 | 12/23 (52%) | ||
nid-1 | NP_001256465.1 | NIDO | 93..232 | CDD:214712 | 37/185 (20%) |
G2F | 398..629 | CDD:214774 | 79/247 (32%) | ||
EGF_3 | 712..747 | CDD:289699 | 13/34 (38%) | ||
EGF_3 | 841..870 | CDD:289699 | 0/28 (0%) | ||
EGF_CA | 954..987 | CDD:304395 | 10/32 (31%) | ||
EGF_CA | 1205..1236 | CDD:304395 | 5/33 (15%) | ||
EGF_3 | 1242..1278 | CDD:289699 | 3/35 (9%) | ||
NHL | <1319..1513 | CDD:302697 | 82/193 (42%) | ||
NHL repeat | 1319..1354 | CDD:271320 | 12/34 (35%) | ||
NHL repeat | 1362..1399 | CDD:271320 | 18/36 (50%) | ||
NHL repeat | 1402..1445 | CDD:271320 | 20/42 (48%) | ||
NHL repeat | 1450..1482 | CDD:271320 | 14/31 (45%) | ||
NHL repeat | 1490..1513 | CDD:271320 | 11/22 (50%) | ||
FXa_inhibition | 1553..>1580 | CDD:291342 | 15/26 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 96 | 1.000 | Domainoid score | I5069 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 388 | 1.000 | Inparanoid score | I1289 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46639 | |
OrthoDB | 1 | 1.010 | - | - | D58517at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002321 | |
OrthoInspector | 1 | 1.000 | - | - | otm16039 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104883 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4861 |
SonicParanoid | 1 | 1.000 | - | - | X2373 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.910 |