DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)12 and EMF2

DIOPT Version :9

Sequence 1:NP_730465.1 Gene:Su(z)12 / 48071 FlyBaseID:FBgn0020887 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_851168.1 Gene:EMF2 / 835198 AraportID:AT5G51230 Length:631 Species:Arabidopsis thaliana


Alignment Length:730 Identity:150/730 - (20%)
Similarity:267/730 - (36%) Gaps:231/730 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GAPDASNAGSTVPPTAEGQV----KLNGHQQEQ---ELFLQAFEKPTQIYRYLRNRHETNPIFLN 84
            |.|..|...|:...:.|...    :|...::|:   |..|.|:.||.::|..::.|...||:||.
plant     3 GIPLVSRETSSCSRSTEQMCHEDSRLRISEEEEIAAEESLAAYCKPVELYNIIQRRAIRNPLFLQ 67

  Fly    85 RTLSYMKERMSRNNKKRISFQV--NSMLESITQKSEAVSQNYLHVIYDSLHEKLPAR-------- 139
            |.|.|   ::...:|:||...|  :..:::..|..:...   |:::...|....|..        
plant    68 RCLHY---KIEAKHKRRIQMTVFLSGAIDAGVQTQKLFP---LYILLARLVSPKPVAEYSAVYRF 126

  Fly   140 -----LDNESGED---------LLQE--QLLCEAGESVSVETTLYKITRSKRKDSTLDFQELLSK 188
                 |....|.|         ||.:  :|..|| :|.|:.........::.....:|..::.| 
plant   127 SRACILTGGLGVDGVSQAQANFLLPDMNRLALEA-KSGSLAILFISFAGAQNSQFGIDSGKIHS- 189

  Fly   189 CSQIVYNPKDRVGEHATIS-IPLQTMRPMGEQHTLYKLLFRIKVLSPSTCNDENAETPPNKRSRP 252
                     ..:|.|...| ||||::....::             ||:....:..:|        
plant   190 ---------GNIGGHCLWSKIPLQSLYASWQK-------------SPNMDLGQRVDT-------- 224

  Fly   253 NEKMFGSELILYEKSSGFITEGEYEAMLQPLNSTSIKSFSPKKCTWETMPDSYIPLSLTYDVYQQ 317
                    :.|.|....||               .:||.|.:||....:|.:  ||:      ..
plant   225 --------VSLVEMQPCFI---------------KLKSMSEEKCVSIQVPSN--PLT------SS 258

  Fly   318 SPMLKFHLTLSNEQLPEMISAPELQRYVQHLDAVAEMNYNNNNYNNNNNCS-----GLKNGSGGG 377
            ||. :..:|:|.|::.....:|                |::.:||:.::.|     .|:.|:   
plant   259 SPQ-QVQVTISAEEVGSTEKSP----------------YSSFSYNDISSSSLLQIIRLRTGN--- 303

  Fly   378 NSTVCKTTPEHIQIVYNFMYSNNTRQQTEYTQELNCPWCGLDCLRLYALLKHLKLCHARFNFTYQ 442
                         :|:|:.|.||..|:||.|::.:||:|.:.|.....|..||...|...||.:.
plant   304 -------------VVFNYRYYNNKLQKTEVTEDFSCPFCLVKCASFKGLRYHLPSTHDLLNFEFW 355

  Fly   443 PAGSGARIDVTIN---------------------------------------------------- 455
            .......::|::.                                                    
plant   356 VTEEFQAVNVSLKTETMISKVNEDDVDPKQQTFFFSSKKFRRRRQKSQVRSSRQGPHLGLGCEVL 420

  Fly   456 DAYDGSYA----------GSPYDLAG--------PSGSSFA--RTCG-PVRRTSV---TSLMVCR 496
            |..|.:::          |..|:..|        |.|:|.|  ::|| |....|:   |.|...:
plant   421 DKTDDAHSVRSEKSRIPPGKHYERIGGAESGQRVPPGTSPADVQSCGDPDYVQSIAGSTMLQFAK 485

  Fly   497 PRRQKTCLDEFLELDEDEISNQRSYITGHNRLYHHTETCLPVHPKEL--DIDSEGESDPLWLRQK 559
            .|:        :.::..::.| ||.:  ..|.:.|:....|:..:::  |.|||.|.|......:
plant   486 TRK--------ISIERSDLRN-RSLL--QKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADFE 539

  Fly   560 TIQMIDEFSDVNEGEKELMKLWNLHVMRHGFVGDCQLPIACEMFLDAKGTEIVR-KNLYRNFILH 623
            ..:|:|:|.||.:.||::|.:||..|.:...:.|..:|.|||.|....|..:|| .:|...:.:.
plant   540 DRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSRLHGPIMVRTPHLIWCWRVF 604

  Fly   624 MCSLFDYGLIAAETV 638
            |..|:::||:.|.|:
plant   605 MVKLWNHGLLDARTM 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)12NP_730465.1 VEFS-Box 511..644 CDD:286776 39/131 (30%)
EMF2NP_851168.1 VEFS-Box 488..624 CDD:401612 39/143 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 61 1.000 Domainoid score I3806
eggNOG 1 0.900 - - E1_KOG2350
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D516359at2759
OrthoFinder 1 1.000 - - FOG0002735
OrthoInspector 1 1.000 - - oto3136
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22597
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2535
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.920

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