DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)12 and Suz12

DIOPT Version :9

Sequence 1:NP_730465.1 Gene:Su(z)12 / 48071 FlyBaseID:FBgn0020887 Length:900 Species:Drosophila melanogaster
Sequence 2:XP_038943572.1 Gene:Suz12 / 688041 RGDID:1593621 Length:738 Species:Rattus norvegicus


Alignment Length:690 Identity:264/690 - (38%)
Similarity:389/690 - (56%) Gaps:90/690 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GSAANGIIGLTHGAPDASNAGSTVPPTAEGQVKLNGHQQEQELFLQAFEKPTQIYRYLRNRHETN 79
            |....|..|.:..:..|:.||:.|.|..  :.|:...|.:.|||||||||||||||:||.|:...
  Rat    44 GGGCGGGGGYSASSSSAAAAGAAVLPVK--KPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIA 106

  Fly    80 PIFLNRTLSYMKERMSRNNKKRISFQVNSMLESI-----TQKSEAVSQNYLHVIYDSLHEKLPAR 139
            ||||:|||:||..|.||.|.||.:|:|:.||..:     .|:|.::|. :|.:.:.....|....
  Rat   107 PIFLHRTLTYMSHRNSRTNIKRKTFKVDDMLSKVEKMKGEQESHSLSA-HLQLTFTGFFHKNDKP 170

  Fly   140 LDNESGEDLLQEQLLCEAGESVSVETTLYKITRSKRKDSTLDFQELLSKCSQIVYNP---KDRVG 201
            ..|...|.           .||::|..|.|:...||||.:...:::.:...|:..||   :.:.|
  Rat   171 SQNSENEQ-----------NSVTLEVLLVKVCHKKRKDVSCPIRQVPTGKKQVPLNPDLNQTKPG 224

  Fly   202 EHATISIPLQTMRPMGEQHTL--YKLLFRIKVLSPSTCNDE-NAETPPN-----------KRSRP 252
            ...::::......| ...|.:  |.||||:........|.. |.||..|           ||:|.
  Rat   225 NFPSLAVSSNEFEP-SNSHMVKSYSLLFRVTRPGRREFNGMINGETNENIDVSEELPARRKRNRE 288

  Fly   253 N-EKMFGSELILYEKSSGF-ITEGEYEAMLQPLNSTSIKSFSPKKCTWETMPD-SYIPLSLTYDV 314
            : ||.|.:::.:::|:... :.:||||..:|.:....|   |.|:.||||:.| ..:|   .::.
  Rat   289 DGEKTFVAQMTVFDKNRRLQLLDGEYEVAMQEMEECPI---SKKRATWETILDGKRLP---PFET 347

  Fly   315 YQQSPMLKFHLTL---SNEQLPEMISAPELQRYVQHLDAVAEMNYNNNNYNNNNNCSGLKNGSGG 376
            :.|.|.|:|.|..   :|::....::.|...|             |:.:.:..|     |.||..
  Rat   348 FSQGPTLQFTLRWTGETNDKSTAPVAKPLATR-------------NSESLHQEN-----KPGSVK 394

  Fly   377 GNSTVC------------------KTTPEHIQIVYNFMYSNNTRQQTEYTQELNCPWCGLDCLRL 423
            ...|:.                  ..|.:.::|.|.|:|:||||||||...:|:||||.|:|.:|
  Rat   395 PAQTIAVKETLTTEMQTRKEKDTSNETRQKLRIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKL 459

  Fly   424 YALLKHLKLCHAR--FNFTYQPAGSGARIDVTINDAYDGSYAGSPYDLAGPSGSSFARTCGPVRR 486
            |:|||||||||:|  ||:.|.|  .||||||:||:.|||||||:|.|:....|.:|:|. |||:|
  Rat   460 YSLLKHLKLCHSRFIFNYVYHP--KGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRN-GPVKR 521

  Fly   487 TSVTSLMVCRPRRQKTCLDEFLELDEDEISNQRSYITGHNRLYHHTETCLPVHPKELDIDSEGES 551
            |.:|.::||||:|.|..:.||||.::.|:..||:|.:||||||.|::||||:.|:|:::|||.|.
  Rat   522 TPITHILVCRPKRTKASMSEFLESEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEK 586

  Fly   552 DPLWLRQKTIQMIDEFSDVNEGEKELMKLWNLHVMRHGFVGDCQLPIACEMFLDAKGTEIVRKNL 616
            ||.|||:|||..|:|||||||||||:|||||||||:|||:.|.|:..||.:|::..|.:|::|||
  Rat   587 DPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYGQKIIKKNL 651

  Fly   617 YRNFILHMCSLFDYGLIAAETVYKTVQKLQGLLSKYAAGQ 656
            .|||:||:.|:.|:.||:..::.|.|.||:.:..|...|:
  Rat   652 CRNFMLHLVSMHDFNLISIMSIDKAVTKLREMQQKLEKGE 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)12NP_730465.1 VEFS-Box 511..644 CDD:286776 74/132 (56%)
Suz12XP_038943572.1 VEFS-Box 545..679 CDD:401612 74/133 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2343
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32256
Inparanoid 1 1.050 406 1.000 Inparanoid score I1840
OMA 1 1.010 - - QHG49982
OrthoDB 1 1.010 - - D122694at33208
OrthoFinder 1 1.000 - - FOG0002735
OrthoInspector 1 1.000 - - oto96130
orthoMCL 1 0.900 - - OOG6_106100
Panther 1 1.100 - - LDO PTHR22597
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2535
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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