DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(z)12 and Suz12

DIOPT Version :10

Sequence 1:NP_730465.1 Gene:Su(z)12 / 48071 FlyBaseID:FBgn0020887 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_954666.1 Gene:Suz12 / 52615 MGIID:1261758 Length:741 Species:Mus musculus


Alignment Length:685 Identity:261/685 - (38%)
Similarity:386/685 - (56%) Gaps:90/685 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 APDASNAGSTVPPTAEGQVKLNGHQQEQELFLQAFEKPTQIYRYLRNRHETNPIFLNRTLSYMKE 92
            |..|:.||:.|.|..  :.|:...|.:.|||||||||||||||:||.|:...||||:|||:||..
Mouse    60 AAAAAAAGAAVLPVK--KPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTLTYMSH 122

  Fly    93 RMSRNNKKRISFQVNSMLESI-----TQKSEAVSQNYLHVIYDSLHEKLPARLDNESGEDLLQEQ 152
            |.||.:.||.:|:|:.||..:     .|:|.::|. :|.:.:.....|......|...|.     
Mouse   123 RNSRTSIKRKTFKVDDMLSKVEKMKGEQESHSLSA-HLQLTFTGFFHKNDKPSQNSENEQ----- 181

  Fly   153 LLCEAGESVSVETTLYKITRSKRKDSTLDFQELLSKCSQIVYNP---KDRVGEHATISIPLQTMR 214
                  .||::|..|.|:...||||.:...:::.:...|:..||   :.:.|...::::......
Mouse   182 ------NSVTLEVLLVKVCHKKRKDVSCPIRQVPTGKKQVPLNPDLNQTKPGNFPSLAVSSNEFE 240

  Fly   215 PMGEQHTL--YKLLFRIKVLSPSTCNDE-NAETPPN-----------KRSRPN-EKMFGSELILY 264
            | ...|.:  |.||||:........|.. |.||..|           ||:|.: ||.|.:::.::
Mouse   241 P-SNSHMVKSYSLLFRVTRPGRREFNGMINGETNENIDVSEELPARRKRNREDGEKTFVAQMTVF 304

  Fly   265 EKSSGF-ITEGEYEAMLQPLNSTSIKSFSPKKCTWETMPD-SYIPLSLTYDVYQQSPMLKFHLTL 327
            :|:... :.:||||..:|.:....|   |.|:.||||:.| ..:|   .::.:.|.|.|:|.|..
Mouse   305 DKNRRLQLLDGEYEVAMQEMEECPI---SKKRATWETILDGKRLP---PFETFSQGPTLQFTLRW 363

  Fly   328 ---SNEQLPEMISAPELQRYVQHLDAVAEMNYNNNNYNNNNNCSGLKNGSGGGNSTVC------- 382
               :|::....::.|...|             |:.:.:..|     |.||.....|:.       
Mouse   364 TGETNDKSTAPVAKPLATR-------------NSESLHQEN-----KPGSVKPAQTIAVKETLTT 410

  Fly   383 -----------KTTPEHIQIVYNFMYSNNTRQQTEYTQELNCPWCGLDCLRLYALLKHLKLCHAR 436
                       ..:.:.::|.|.|:|:||||||||...:|:||||.|:|.:||:|||||||||:|
Mouse   411 ELQTRKEKDNSNESRQKLRIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCHSR 475

  Fly   437 --FNFTYQPAGSGARIDVTINDAYDGSYAGSPYDLAGPSGSSFARTCGPVRRTSVTSLMVCRPRR 499
              ||:.|.|  .||||||:||:.|||||||:|.|:....|.:|:|. |||:||.:|.::||||:|
Mouse   476 FIFNYVYHP--KGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRN-GPVKRTPITHILVCRPKR 537

  Fly   500 QKTCLDEFLELDEDEISNQRSYITGHNRLYHHTETCLPVHPKELDIDSEGESDPLWLRQKTIQMI 564
            .|..:.||||.::.|:..||:|.:||||||.|::||||:.|:|:::|||.|.||.|||:|||..|
Mouse   538 TKASMSEFLESEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQI 602

  Fly   565 DEFSDVNEGEKELMKLWNLHVMRHGFVGDCQLPIACEMFLDAKGTEIVRKNLYRNFILHMCSLFD 629
            :|||||||||||:|||||||||:|||:.|.|:..||.:|::..|.:|::|||.|||:||:.|:.|
Mouse   603 EEFSDVNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYGQKIIKKNLCRNFMLHLVSMHD 667

  Fly   630 YGLIAAETVYKTVQKLQGLLSKYAAGQELMQRQRE 664
            :.||:..::.|.|.||:.:..|...|:.......|
Mouse   668 FNLISIMSIDKAVTKLREMQQKLEKGESATPSNEE 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)12NP_730465.1 ZnB-Zn_SUZ12-like 54..>82 CDD:459250 19/27 (70%)
C2_II_SUZ12 154..328 CDD:467848 51/196 (26%)
ZnB-Zn_SUZ12 <388..459 CDD:439246 43/72 (60%)
VEFS-Box 511..644 CDD:462864 74/132 (56%)
Suz12NP_954666.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Interaction with JARID2 and EPOP. /evidence=ECO:0000250|UniProtKB:Q15022 81..108 19/26 (73%)
ZnB-Zn_SUZ12-like 84..>112 CDD:459250 19/27 (70%)
Interaction with AEBP2 and PHF19. /evidence=ECO:0000250|UniProtKB:Q15022 148..365 58/235 (25%)
C2_II_SUZ12 157..364 CDD:467848 55/225 (24%)
ZnB-Zn_SUZ12 <425..498 CDD:439246 43/74 (58%)
VEFS-box_SUZ12 565..686 CDD:439216 69/120 (58%)
VEFS-box 565..641 50/75 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 689..741 3/14 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.