DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)12 and rsc7

DIOPT Version :10

Sequence 1:NP_730465.1 Gene:Su(z)12 / 48071 FlyBaseID:FBgn0020887 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_588169.1 Gene:rsc7 / 2538836 PomBaseID:SPCC1281.05 Length:390 Species:Schizosaccharomyces pombe


Alignment Length:222 Identity:45/222 - (20%)
Similarity:74/222 - (33%) Gaps:84/222 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 PAGSGARIDVTINDAYDGSYAGSPYDLAGPSGSSFARTCGPVRRTSVTSLMVCRPRRQKTCLDEF 507
            |.||.|....:.:|  |..|:|              ||   .||...|...|..|....|.:.:.
pombe    27 PKGSYAAYGSSDDD--DEEYSG--------------RT---RRRNRNTRPRVSAPSSSSTVVPKD 72

  Fly   508 L-----ELDEDEIS------------NQRSYITGHNRLYHHTETCLPVHPKELDIDSE-----GE 550
            |     .|::||::            |:..|:.|.......|.|||....:...:.:|     |.
pombe    73 LYSHRATLEDDELNFGVVDPEGEKKVNELGYLNGGREYRCRTFTCLGRGNRLYMLSTEPARAMGY 137

  Fly   551 SDP--LWLRQKTIQMIDEFSDVNEGEKELMKLWNLHVMRHGFVGDCQLPIACEMFLDAKGTEIVR 613
            .|.  |:|:.:::..|    .|::.||     |:|                              
pombe   138 RDSYLLFLKHRSLHKI----IVDDSEK-----WDL------------------------------ 163

  Fly   614 KNLYRNFILHMCSLFDYGLIAAETVYK 640
              :.||.|.|.......|::||.::::
pombe   164 --IERNIIPHSYKGRAVGIVAARSIFR 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)12NP_730465.1 ZnB-Zn_SUZ12-like 54..>82 CDD:459250
C2_II_SUZ12 154..328 CDD:467848
ZnB-Zn_SUZ12 <388..459 CDD:439246 5/15 (33%)
VEFS-Box 511..644 CDD:462864 27/149 (18%)
rsc7NP_588169.1 CRC_subunit 81..214 CDD:430112 27/149 (18%)
Blue background indicates that the domain is not in the aligned region.

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