DRSC/TRiP Functional Genomics Resources

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Protein Alignment rin and G3BP2

DIOPT Version :9

Sequence 1:NP_524907.2 Gene:rin / 47998 FlyBaseID:FBgn0015778 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_036429.2 Gene:G3BP2 / 9908 HGNCID:30291 Length:482 Species:Homo sapiens


Alignment Length:688 Identity:216/688 - (31%)
Similarity:293/688 - (42%) Gaps:233/688 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVMDATQSQQPSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYIHG-------ESKLVVGQRE 58
            |||     ::|||..|||||||||||||||||.:|||||..||||:||       ..:.|.||.:
Human     1 MVM-----EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQND 60

  Fly    59 IHNRIQQLNFNDCHAKISQVDAQATLGNGVVVQVTGELSNDGQPMRRFTQTFVLAAQS--PKKYY 121
            ||:::..|||::||.||..|||.|||.:||||||.|.|||.|||.|:|.||||||.:.  |.|:|
Human    61 IHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125

  Fly   122 VHNDIFRYQDLYIEDEQDGESRSENDEEHDVQVVGGTVDQAVQVAGDVVAQQPQQQQAPPQPQAQ 186
            ||||:|||     |||..|:|..|.|||.:                |.|.::.:::|..|:|..:
Human   126 VHNDMFRY-----EDEVFGDSEPELDEESE----------------DEVEEEQEERQPSPEPVQE 169

  Fly   187 VVVP--QQVAPVAAGGAAP--QQIFYPLPAGAAAGRPVAVLPPAPQAAAVPLPAQFTVPPP-QPI 246
            ....  .:..||..|...|  :....|.|...:..:...:.|...:.....|..:.|.||| :|:
Human   170 NANSGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAEPV 234

  Fly   247 QNGVVSHEELQQQQVLVPPS----VSPLVQQQQPTGTPVLPIVPVPSAGFQQSPLVAPQLIQQQQ 307
                    .|.|:    ||.    .|...:...|:||       |.|:|                
Human   235 --------SLPQE----PPKAFSWASVTSKNLPPSGT-------VSSSG---------------- 264

  Fly   308 QQQPAQLPPQQQQQQQPIQQQQPLQQQQQPLAEPEEVEVAPR-QQKPPTPVEDFKTIHEQQQQEK 371
                  :||                ..:.|:::| .||..|. |.:||       .:.||:.:|:
Human   265 ------IPP----------------HVKAPVSQP-RVEAKPEVQSQPP-------RVREQRPRER 299

  Fly   372 YEAAKQQQNEPKTYANLFKSTSSSPSGFVNAALQQQQQLQQQQQQQQSISSNTYNSSSATSGGGN 436
                                     .||                                     
Human   300 -------------------------PGF------------------------------------- 302

  Fly   437 GSQVSYSTTASSYNNSNGNSRLDNGGPLPQRNNSIRNNKGDFEQRRSSNTQ--QFGDNQQLFLGN 499
                                  ...||.|.|        ||.||..|.|.:  ::.|:.|||:||
Human   303 ----------------------PPRGPRPGR--------GDMEQNDSDNRRIIRYPDSHQLFVGN 337

  Fly   500 IPHHASEDDLREIFSRFGNVLELRILSK-AGNKVPPGMRSPLNYGFITYDDPEAVQKCLANCPLY 563
            :||...|::|:|.|..||||:||||.:| .|.|:|       |:||:.:||.|.||:.|...|:.
Human   338 LPHDIDENELKEFFMSFGNVVELRINTKGVGGKLP-------NFGFVVFDDSEPVQRILIAKPIM 395

  Fly   564 FPENSPDGQ-KLNVEEKKPRVRNDMVPRQQIGGNNLNNNMGRLGGNNGPQSRPMGNNNG-SGGGM 626
            |     .|: :|||||||.|...:   |:..||.:...::.|  .:.||     |...| .||||
Human   396 F-----RGEVRLNVEEKKTRAARE---RETRGGGDDRRDIRR--NDRGP-----GGPRGIVGGGM 445

  Fly   627 MRNNAGGNNLRQGGGGGNGAPRLGGGGGFGQRQDNRTG 664
            ||:..|.....:||    .|.:||.|.|.||.:...||
Human   446 MRDRDGRGPPPRGG----MAQKLGSGRGTGQMEGRFTG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rinNP_524907.2 NTF2 12..131 CDD:238403 79/127 (62%)
RRM 423..>557 CDD:223796 42/136 (31%)
RRM_G3BP 490..580 CDD:240675 41/91 (45%)
G3BP2NP_036429.2 NTF2 7..135 CDD:238403 79/132 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..172 10/47 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..318 44/287 (15%)
RRM_G3BP2 326..408 CDD:409897 41/93 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 408..482 28/86 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159140
Domainoid 1 1.000 157 1.000 Domainoid score I4157
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53615
OrthoDB 1 1.010 - - D1526879at2759
OrthoFinder 1 1.000 - - FOG0000749
OrthoInspector 1 1.000 - - otm41493
orthoMCL 1 0.900 - - OOG6_102794
Panther 1 1.100 - - O PTHR10693
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X634
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.860

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