Protein Alignment rin and AT5G43960

DIOPT Version :9

• Sequence 1: NP_524907.2
• Gene: rin / 47998
• FlyBaseID: FBgn0015778
• Length: 690
• Species: Drosophila melanogaster
• Sequence 2: NP_199209.1
• Gene: AT5G43960 / 834419
• AraportID: AT5G43960
• Length: 450
• Species: Arabidopsis thaliana
• Alignment Length: 727
• Identity: 141/727 - (19%)
• Similarity: 215/727 - (29%)
• Gaps: 330/727 - (45%)

  Fly    11 PSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYIH--GESKLVVGQ-REIHNRIQQLNFNDCH 72
            |....||..||.|||.:|.:.|:.:|:||:..|..|.  |:|...... ..|||.:..|||....
plant     6 PGATQVGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIRIDGDSTETANSLLHIHNMVMSLNFTAIE 70

  Fly    73 AK-ISQVDAQATLGNGVVVQVTG-----ELSNDGQPMRRFTQTFVLAAQSPKKYYVHNDIFRY-- 129
            .| |:.|::..   .||:|.|:|     |.||    .|.|.|||.||.|. |.|:|.:|:|.:
plant    71 VKTINSVESWE---GGVLVVVSGSVKTKEFSN----RRSFVQTFFLAPQE-KGYFVLSDVFLFVD 127

  Fly   130 -------QDLYIEDEQDGESRSENDEEHDVQVVGGTVDQ-------AVQVAGDVVAQQP-QQQQA 179
                   |..|:.:.:.....:......|.||....:::       |||:..|:|.:.. |:.|.
plant   128 EGTVYYHQPSYLSEIKHEAQLNPPTRHPDPQVSDYVLEEEASDYVNAVQIKDDLVDKYSLQEDQH 192

  Fly   180 PPQ-------------PQAQVVV----PQQVAPVAAGGAAPQQIFYPLPAGAAAGRPVAVLPPAP 227
            .||             |:.:|.|    ..:.|||........::.|           .::|..|.
plant   193 QPQHEDYEDEVAIEETPREEVAVDVVHEHRAAPVEEPVGEKSKMSY-----------ASILKVAK 246

  Fly   228 QAAAVPLPAQFTVPPPQPIQNGVVSHEELQQQQVLVPPSVSPLVQQQQPTGTPVLPIVPVPSAGF 292
            :||.||:.|      .||..|
plant   247 EAATVPVAA------TQPSYN-------------------------------------------- 261

  Fly   293 QQSPLVAPQLIQQQQQQQPAQLPPQQQQQQQPIQQQQPLQQQQQPLAEPEEVEVAPRQQKPPTPV 357
                                             :..|.:.:..||:..|     :|:...|..|:
plant   262 ---------------------------------KSSQDINEWDQPMRTP-----SPQLAAPLAPI 288

  Fly   358 EDFKTIHEQQQQEKYEAAKQQQNEPKTYANLFKSTSSSPSGFVNAALQQQQQLQQQQQQQQSISS 422
                                ||:...||.:.:.:.:...|||
plant   289 --------------------QQSNSSTYVSDYGAEAEDGSGF----------------------- 310

  Fly   423 NTYNSSSATSGGGNGSQVSYSTTASSYNNSNGNSRLDNGGPLPQRNNSIRNNKGDFEQRRSSNTQ 487
                                                                 .|||.:
plant   311 -----------------------------------------------------EDFEFK------ 316

  Fly   488 QFGDNQQLFLGNIPHHASEDDLREIFSRFGNVLELRILSKAGNKVPPGMRSPLNYGFITYDDPEA 552
                  .:::.|:|...|..::.|.|..||.:....:..:....|     ..:.|.|:.::|..:
plant   317 ------SVYVRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRKDV-----MGVCYAFVEFEDMTS 370

  Fly   553 VQKCLANCPLYFPENSPDGQKLNVEEKKPRVRNDMVPRQQIGGNNLNNNMGRLGGNNGPQSRPMG 617
            |:..:...|:|.     .|:::.:||::|
plant   371 VENAIKASPIYL-----GGRQVYIEERRP------------------------------------ 394

  Fly   618 NNNGSGGGMMRNNAGGNNLRQGGGGGNG-----APRLGGGGGFGQRQDNRTGGGNNQSNGPLRGA 677
                       |.||....|:|||.|.|     |||    |.||    .|..|..||..|..|..
plant   395 -----------NPAGVRGARRGGGRGRGGYPTEAPR----GRFG----GRGSGRGNQDGGDYRPR 440

  Fly   678 GNGQSGGGNYGR 689
            |||...||  ||
plant   441 GNGYYRGG--GR 450

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rin	NP_524907.2	NTF2	12..131	CDD:238403	46/136 (34%)
		RRM	423..>557	CDD:223796	15/133 (11%)
		RRM_G3BP	490..580	CDD:240675	17/89 (19%)
AT5G43960	NP_199209.1	NTF2	8..127	CDD:238403	46/126 (37%)
		RRM	<314..>395	CDD:223796	19/149 (13%)
		RRM_SF	318..390	CDD:240668	15/81 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	137	1.000	Inparanoid score	I1815
OMA	1	1.010	-	-		QHG53615
OrthoDB	1	1.010	-	-		D1526879at2759
OrthoFinder	1	1.000	-	-		FOG0000749
OrthoInspector	1	1.000	-	-		otm3238
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10693
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X634
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	9.080