Protein Alignment rin and AT3G07250

DIOPT Version :10

• Sequence 1: NP_524907.2
• Gene: rin / 47998
• FlyBaseID: FBgn0015778
• Length: 690
• Species: Drosophila melanogaster
• Sequence 2: NP_001319490.1
• Gene: AT3G07250 / 819913
• AraportID: AT3G07250
• Length: 677
• Species: Arabidopsis thaliana
• Alignment Length: 707
• Identity: 134/707 - (18%)
• Similarity: 241/707 - (34%)
• Gaps: 216/707 - (30%)

  Fly    10 QPSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSY----IHGESKLVVGQREIHNRIQQLNFND 70
            :|:...||.||.||||..|..||.:|::.|...|:.    :.|..::....:::..| ...:|:.
plant     4 RPNTAKVGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDLKWR-SPGSFDS 67

  Fly    71 CHAKISQVDAQATLGNGVVVQVTGELSNDGQPMRRFTQTFVLAAQSPKKYYVHNDIFRYQDLYIE 135
              .||:.|.:|.:|..|::|.|.|.|:.:.:|.|.|||.|.|..|. |.|.|..|:||:.|:
plant    68 --VKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQE-KGYIVCTDMFRFVDI--- 126

  Fly   136 DEQDGESRSENDEEHDVQVVGGTVDQAVQVAGDVVAQQPQQQQAPPQPQAQVVVPQQVAPVAAGG 200
                                 ...:.|:..|.||:     :::.|....|.:.|.:
plant   127 ---------------------PEANAAIPPANDVI-----EEKVPETEGAALRVSE--------- 156

  Fly   201 AAPQQIFYPLPAGAAAGRPVAVLPPAPQAAAVPLPAQFTVPPPQPIQNGVVSHEELQQQQVLV-- 263
              |...|..:|..:.|....|:.     |..:||.|....     ::|......|:::..|.|
plant   157 --PNHGFDNVPKLSCASEGAAIC-----AKKLPLDATIAF-----VENAFKQFGEIRRGGVEVRI 209

  Fly   264 ----PPSVSPLVQQQQPTGTPVLPIVPVPSAGF---------------------QQSPLVAPQLI 303
                ....:.:..::.......:...|:...|:                     |.|     |.|
plant   210 NWHCTGKYAYVEFEEAEAANRAIMASPISIDGYRTYVEKKYAYNKSADTGNGNSQDS-----QAI 269

  Fly   304 QQQQQQQPAQLPPQQQQQ--QQPIQQQQPLQQQQQPLAEP------------EEVEVAPRQ-QKP 353
            .:....:...|||.....  :...:|..|:::.:..:..|            ||.:.|.|. |..
plant   270 TEDAHIRVKDLPPNATVALVESVFKQFGPIKKGRIRVINPANSNYWYAFVEFEEADAAKRAIQAS 334

  Fly   354 PTPVEDFKTIHEQQQQEKYEAAKQQQNEPKTYANLFKSTSSSPSGFVNAA--------------- 403
            |..|:...|..||:|              ..|...::|.|..|.......
plant   335 PLNVDGHTTYVEQKQ--------------PYYEGYYESPSDGPGNIKRGEGVRGSLGNPICNWQK 385

  Fly   404 -----------LQQQQQLQQQQQQQ---QSISSNTYNSSSATSGGGNGSQVSYSTTASSYNNSNG 454
                       ||..|::..|.::|   |......||.:..||....|::
plant   386 MEEVRGTDVYDLQNWQKIMNQSEEQMKFQEEEGRQYNQNRYTSEEVRGTE--------------- 435

  Fly   455 NSRLDNGGPLPQRNNSIRNNKGDFEQRRSSNTQQFGDNQQ--LFLGNIPHHASEDDLREIFSRFG 517
                  |..|.:......|.  ::|::|....::..::.:  :||..:|...:...:.:...:||
plant   436 ------GVGLEEEEEEEENQ--NWEEQRKIQEEEGTESHEASVFLKRLPLDVTFALIEDALKKFG 492

  Fly   518 NVLELRILSKAGNKVPPGMRSPL-NYGFITYDDPEAVQKCLANCPLYFPENSPDGQKLNVEEK-- 579
            .:..:.|: |:|         || .:.|:.::..:...:.:...|:...|     :.:||::|
plant   493 PINAISII-KSG---------PLYKFAFVDFEKADVANRAIMASPVRICE-----KNVNVQKKLS 542

  Fly   580 --------KPRVRNDMVPRQQIGGNNLNNNMGRLGGNNGPQSRPMGNNNGSGGGMMR 628
                    :|..|:..||               ||..:|  .|..|:.|..|...:|
plant   543 AGAGKRYTRPTCRDTSVP---------------LGAESG--HREQGSQNRYGSEQVR 582

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rin	NP_524907.2	NTF2	12..131	CDD:238403	41/122 (34%)
		RRM_G3BP	490..580	CDD:409676	16/102 (16%)
AT3G07250	NP_001319490.1	NTF2	9..125	CDD:238403	41/119 (34%)
		PABP-1234	176..>353	CDD:130689	31/205 (15%)
		RRM_SF	275..>333	CDD:409669	10/57 (18%)
		RRM_1	470..>523	CDD:425453	11/62 (18%)