DRSC/TRiP Functional Genomics Resources

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Protein Alignment rin and G3bp2

DIOPT Version :9

Sequence 1:NP_524907.2 Gene:rin / 47998 FlyBaseID:FBgn0015778 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_001074263.1 Gene:G3bp2 / 23881 MGIID:2442040 Length:482 Species:Mus musculus


Alignment Length:689 Identity:209/689 - (30%)
Similarity:291/689 - (42%) Gaps:235/689 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVMDATQSQQPSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYIHG-------ESKLVVGQRE 58
            |||     ::|||..|||||||||||||||||.:|||||..||||:||       ..:.|.||.:
Mouse     1 MVM-----EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQND 60

  Fly    59 IHNRIQQLNFNDCHAKISQVDAQATLGNGVVVQVTGELSNDGQPMRRFTQTFVLAAQS--PKKYY 121
            ||:::..|||::||.||..|||.|||.:||||||.|.|||.|||.|:|.||||||.:.  |.|:|
Mouse    61 IHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125

  Fly   122 VHNDIFRYQDLYIEDEQDGESRSENDEEHDVQVVGGTVDQAVQVAGDVVAQQPQQQQAPPQPQAQ 186
            ||||:|||     |||..|:|..|.|||.:.:|                  :.:|:...|.|:  
Mouse   126 VHNDMFRY-----EDEVFGDSEPELDEESEDEV------------------EEEQEDRQPSPE-- 165

  Fly   187 VVVPQQVAPVAAGGAAPQQIFYPLPAGAAAGRPVAVLPPAPQAAAVPLPAQFTVPPPQPIQNGVV 251
                    ||.....:.....:|:..|        :..|..:::..|.|...:....:.::..|.
Mouse   166 --------PVQENANSAYYDAHPVTNG--------IEEPLEESSHEPEPEPESETKTEELKPQVE 214

  Fly   252 SH--EELQQQQVLVPPSVSPLVQQQQP--------TGTPVLPIVPVPSAGFQQSPLVAPQLIQQQ 306
            ..  |||:::....||:....:.|:.|        |...:.|...|.|:|               
Mouse   215 EKHLEELEEKSATPPPAEPASLPQEPPKAFSWASVTSKNLPPSGTVSSSG--------------- 264

  Fly   307 QQQQPAQLPPQQQQQQQPIQQQQPLQQQQQPLAEPEEVEVAPR-QQKPPTPVEDFKTIHEQQQQE 370
                   :||                ..:.|:::| .|:..|. |.:||       .:.||:.:|
Mouse   265 -------IPP----------------HVKAPVSQP-RVDAKPEVQSQPP-------RVREQRPRE 298

  Fly   371 KYEAAKQQQNEPKTYANLFKSTSSSPSGFVNAALQQQQQLQQQQQQQQSISSNTYNSSSATSGGG 435
            :                         .||                                    
Mouse   299 R-------------------------PGF------------------------------------ 302

  Fly   436 NGSQVSYSTTASSYNNSNGNSRLDNGGPLPQRNNSIRNNKGDFEQRRSSNTQ--QFGDNQQLFLG 498
                                   ...||.|.|        ||.||..|.|.:  ::.|:.|||:|
Mouse   303 -----------------------PPRGPRPGR--------GDMEQNDSDNRRIIRYPDSHQLFVG 336

  Fly   499 NIPHHASEDDLREIFSRFGNVLELRILSK-AGNKVPPGMRSPLNYGFITYDDPEAVQKCLANCPL 562
            |:||...|::|:|.|..||||:||||.:| .|.|:|       |:||:.:||.|.||:.|...|:
Mouse   337 NLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLP-------NFGFVVFDDSEPVQRILIAKPI 394

  Fly   563 YFPENSPDGQ-KLNVEEKKPRVRNDMVPRQQIGGNNLNNNMGRLGGNNGPQSRPMGNNNG-SGGG 625
            .|     .|: :|||||||.|...:   |:..||.:...::.|  .:.||     |...| .|||
Mouse   395 MF-----RGEVRLNVEEKKTRAARE---RETRGGGDDRRDIRR--NDRGP-----GGPRGIVGGG 444

  Fly   626 MMRNNAGGNNLRQGGGGGNGAPRLGGGGGFGQRQDNRTG 664
            |||:..|.....:||    ...:||.|.|.||.:...||
Mouse   445 MMRDRDGRGPPPRGG----MTQKLGSGRGTGQMEGRFTG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rinNP_524907.2 NTF2 12..131 CDD:238403 79/127 (62%)
RRM 423..>557 CDD:223796 42/136 (31%)
RRM_G3BP 490..580 CDD:240675 41/91 (45%)
G3bp2NP_001074263.1 NTF2 7..135 CDD:238403 79/132 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..170 11/57 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..318 38/268 (14%)
RRM_G3BP2 326..408 CDD:240910 41/93 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 408..482 27/86 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849510
Domainoid 1 1.000 157 1.000 Domainoid score I4155
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000749
OrthoInspector 1 1.000 - - otm43543
orthoMCL 1 0.900 - - OOG6_102794
Panther 1 1.100 - - O PTHR10693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R463
SonicParanoid 1 1.000 - - X634
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.880

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