DRSC/TRiP Functional Genomics Resources

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Protein Alignment scat and VPS54

DIOPT Version :10

Sequence 1:NP_524905.1 Gene:scat / 47942 FlyBaseID:FBgn0011232 Length:940 Species:Drosophila melanogaster
Sequence 2:NP_010310.1 Gene:VPS54 / 851591 SGDID:S000002434 Length:889 Species:Saccharomyces cerevisiae


Alignment Length:869 Identity:167/869 - (19%)
Similarity:301/869 - (34%) Gaps:253/869 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 YHVNQHTREMPPEWGVYSAAQNLPAVLNDPSRGKQSNLFTKKWGEHFVERSHVPPSPRLPDITHA 171
            |.:..:||.  ..|      .|.|.|.:.|......|.....|..|.:|                
Yeast   114 YEIVMNTRR--KNW------LNYPTVADIPQVSLSKNDLDDHWKTHVIE---------------- 154

  Fly   172 DFTVYLGSIGKRYRWHE-----RRQQQLERDKPLENG------------AQGAPGPGTGGQTPTH 219
                |:.:|...|:..:     |...|:|:.|.|..|            .||         ....
Yeast   155 ----YVKNIKSDYQIFQSTNNIRNMNQMEQLKELREGENMHEESFEANLRQG---------DAEL 206

  Fly   220 LSSVPEIFLKSQLQLHHPATFKQVFPNY--------MQTSASSPESHQQTGRQLQEQLSHYLDMV 276
            ::|:|:.:...:.||.:|.||.:|....        |:..|...|:..    :|:::|:.:||:|
Yeast   207 INSIPDFYFSDKFQLDNPRTFHKVLDAIDLFLTKLDMKRQAERDEAFS----ELRDRLNDFLDIV 267

  Fly   277 EVKIAQQVSQKSAAFFHAMTTQHAI-------LAEMEQAADQVR-----QLRAALAELHSHSVVD 329
            |..:..::|:.|..||||::....|       ::|:::.|..::     .:|..::  |...:..
Yeast   268 ETLLVTEISKSSHKFFHALSEVDNIQKRALDTMSELKELAQNIKTIDAENIRKKIS--HLEMIFK 330

  Fly   330 SFKVLRFAQRRQHYNLTL---DKLRLMATVHKTQPMLQLLLGTQDYVAALDLIGTTQEILSAELL 391
            ...|.:..|......|.|   |:.:.|...:|....|:|:......:...|.|  .:::.|    
Yeast   331 RKNVEKLEQGLLQAKLVLNKTDECKSMYEENKLDNCLELIKSIDYLIKGDDSI--NEDVQS---- 389

  Fly   392 GIHCFKHLPMQLSEMEKLIDKMLTTEFERYA--------AADLNRPLTDALRETDSVCAE----- 443
            ...|:   |.:||.:..:.....|.||....        :..|:..|.|.||   |.|..     
Yeast   390 WTRCW---PYKLSNLRTIPALSATREFLTNMKIEIGGKFSLQLSILLIDDLR---SFCKSIKPKE 448

  Fly   444 ---------------------EDKLVAIVMGLLRKQNF-SFVQAYQQEAIATIRAIIKQLLIEVL 486
                                 ..|:..:::.|.|.:.. |....|::::|..:::|||..|....
Yeast   449 TLHRIQTGSNDKKQTIFTDNFSSKITELIVRLNRCEELTSAFDLYREKSITELKSIIKIYLPTEN 513

  Fly   487 ARSDSDQEISLTGHGEQA--------LELTLPEWIALLQRSSQALVSI----LERIKTVVGIMQQ 539
            |.:|::.:.....:|..:        .|.|..|:.::       ||:|    ||.::.:.|..:.
Yeast   514 AHADNNHDEKHLNNGSTSGSKLSRLIKEQTPAEFQSM-------LVNIFTHALEALRRLYGHQKL 571

  Fly   540 TADAAVGAQDAVNLIDSEAFLSPGHHEQLKNQLQQL-----LQAVCHYCHERCANIVSPQSLERS 599
            ..|        ::|.:..:..||  :|...|.:.||     :..:......|...|:        
Yeast   572 LLD--------ISLNELASVKSP--NENQHNMITQLDIRTGINEIIRIIQLRTGKII-------- 618

  Fly   600 SASEQELFQLSEIVDHF------------------GE-TTRSICGVASVPLQLALKVQASRYAQR 645
             |..:|| .||...|:|                  || .|:.:..|        |..|...||..
Yeast   619 -AVRREL-NLSLRYDYFLKFYAICVIFIQECEVLSGEFLTKYLSNV--------LASQIKHYANA 673

  Fly   646 FHSERKQKLSLLLDQERW-----------------RQVDI-PHEFQRIIERMAAG---------- 682
            ..|:..:.:...:|.|.|                 ..:|| |..:..|:: |..|          
Yeast   674 QSSKNYRNIKKKIDAEEWIPYIVDSSIQSDVNDIVSSIDIDPLSWTTILD-MVGGSHDCENGRSE 737

  Fly   683 DYAKPEMGNLISNGAGNPVLLVEGKQPYTLVSASLMLIRMLYEYGCSAHRLP-LLASYHARNVVD 746
            |..|.| ||....|....|  |.|.:.:...|:.|..|.::.|....:..|| :..|...:...|
Yeast   738 DKEKDE-GNETYQGHRKSV--VVGDKTFVASSSLLATIEVIKELMVLSINLPSIYLSNFEKLCYD 799

  Fly   747 LLRCFNSRSCQLIIGAGAMRVAGLKTITSTNLALVSRALQLVLWLLPKLKEHFQAMSGYETIERD 811
            .|:.:||.:...:...|...:.     |..||:::..:|..:...:..::..:|.:|   ...||
Yeast   800 ALQYYNSSAMASVTQPGNSLLK-----TGRNLSIMGESLDCLAEFVIIVQRFYQRLS---NSNRD 856

  Fly   812 YQ-----------GHIKEIENKIH 824
            ::           |..:...|||:
Yeast   857 FEPFDASHYTTLLGQFQASSNKIY 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scatNP_524905.1 COG2 268..>418 CDD:473160 33/164 (20%)
Vps54 708..829 CDD:462318 24/129 (19%)
DUF4164 <810..867 CDD:433450 6/26 (23%)
VPS54NP_010310.1 None

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