DRSC/TRiP Functional Genomics Resources

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Protein Alignment scat and VPS54

DIOPT Version :9

Sequence 1:NP_524905.1 Gene:scat / 47942 FlyBaseID:FBgn0011232 Length:940 Species:Drosophila melanogaster
Sequence 2:NP_193684.4 Gene:VPS54 / 827690 AraportID:AT4G19490 Length:1034 Species:Arabidopsis thaliana


Alignment Length:1026 Identity:245/1026 - (23%)
Similarity:434/1026 - (42%) Gaps:258/1026 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 SAAQNLPAVLNDPSRGKQ----SNLFTKKW--GEHFVERSHVPP--SPRLP--DITHADFTVYLG 178
            :::|:|.::||:|..||.    |:.....|  ...||..:...|  |.:||  ::|.:||..|:.
plant    43 ASSQSLSSILNNPHGGKSGVYGSDASWVGWWSSSTFVAPAEFAPVASTKLPGSELTRSDFHGYVS 107

  Fly   179 SIGKRY-RWHERRQQQLERDKPLENGAQGAPGPGTGGQTPTHLS-------SVPEIFLKSQLQLH 235
            ||.:.: |:.:.|:...|.              ..|....:|:|       .||.::.|....|.
plant   108 SISESHGRFEDIRKHTREE--------------SCGFDQESHVSGLAACLREVPSLYFKEDFALE 158

  Fly   236 HPATFKQVFPNYMQTSASSPESHQQTGRQLQEQLSHYLDMVEVKIAQQVSQKSAAFFHAMTTQHA 300
            ..|||:          ::.|.|.......|||:||.|||:||:.:.:::|.:|.:||.|......
plant   159 DGATFR----------SACPFSSLNENLALQEKLSQYLDVVELHLVKEISVRSDSFFEAQGQLQD 213

  Fly   301 ILAEMEQAADQVRQLRAALAELHSHSVVDSFKVLRFAQRRQHYNLTLD-KLRLMATVHKTQPMLQ 364
            :..::.:...::|:|:..: .|...::|||.:.::.....:...|.|. ||||:..|::....|:
plant   214 LNVKIVEGCSRIRELKETI-RLLDRNLVDSARQIQELSSTRINMLELQRKLRLILYVNQALSALK 277

  Fly   365 LLLGTQDYVAALDLIGTTQEILSA-ELLGIHCFKHLPMQLSEMEKLIDKMLTTEFERYAAADLNR 428
            ||:.:.|...|||:....|.:|:. ||.|::||:||...::.....|:.:||:||.|.:..|...
plant   278 LLVASADCAGALDITDDLQNLLAGDELTGLYCFRHLRDHVTSSIDSINSILTSEFMRISIHDTGE 342

  Fly   429 PLTDAL-------------------------RETDSVCAEEDKLVAIVMGLLRKQNF-SFVQAYQ 467
              .|.|                         .:|.::|   |:|:.:|:||||...| |.::.|:
plant   343 --IDVLILSAANIRGSISSNGNTGEEVKLEEEDTSTLC---DRLLPLVIGLLRTAKFPSILRMYR 402

  Fly   468 QEAIATIRAIIKQLLIEVL----ARS-DSDQEISLTGHGEQALE----LTLPEWIALLQRSSQAL 523
            ....:.::..||:.:.::|    ||| :||     ..|||::::    |:|...:..|  ||:|.
plant   403 DTLTSEMKNAIKKAVADLLPILVARSLESD-----FSHGERSVDDGGGLSLASKLRTL--SSEAF 460

  Fly   524 VSILERI---------------KTVVGIM-----QQTADA-----AVGA---------------- 547
            |::|..|               |.:..|:     ...||:     ||||                
plant   461 VNLLTAIFKIVQAHLVRASEVKKAIEWILCNIDGHYAADSVAAAIAVGAVAAETAQEIGFQGGSL 525

  Fly   548 -------------------QDAVNLIDSEAFLSPGHHEQLKNQLQQLLQAVCHYCHERCANIVSP 593
                               .||.:|::    :|......:..:..:.:.|.|...|.|.|.::..
plant   526 VSSPLGKATSKAPPLQGKSSDASSLMN----MSRNFRADVLRENTEAVFAACEVTHGRWAKLLGV 586

  Fly   594 QSLERSSASEQELFQLSEIVDHFGETTRSICGVASVPLQLALKVQASRYAQRFHSERKQKLSLLL 658
            ::|.......||...:.::...|..:|..|.|.....::..|:.||..:....|..|..||..:|
plant   587 RALLHPKLKLQEFMSIYDLTQEFITSTEKIGGRLGSSIRGTLQSQAKAFVDSQHESRMTKLKAVL 651

  Fly   659 DQERWRQVDIPHEFQRII------ERMAAG----------------------------------D 683
            |||.|.::|:|.|||.||      :|:.:|                                  :
plant   652 DQETWDEIDVPEEFQSIISSLFASQRLISGKVDDADLNSYHSNRLPLNGSLTSGSGDQNSELRNE 716

  Fly   684 YAKPEMGNLISNGAGNPVLLVE----------------------GKQ-------PYTLVSASLML 719
            .::...|:::|:....|.:..|                      ||.       .|.:|:..|:|
plant   717 KSESSEGSVVSDAQVKPTVSPESLERSKAGVSSATNNQSNQKAHGKSNLFYQGVGYHMVNCGLIL 781

  Fly   720 IRMLYEYGCSAHRLPLLASYHARNVVDLLRCFNSRSCQLIIGAGAMRVAGLKTITSTNLALVSRA 784
            ::||.||....:.||.|:|.....||::||.||:|:|||::|||||:|:|||:|.:.:|||.|:.
plant   782 LKMLSEYIDMNNSLPALSSEIVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHLALASQV 846

  Fly   785 LQLVLWLLP--------KLKEHFQAMSGYE--TIERDYQGHIKEIENKIHGIVSERLAAQL---- 835
            :.....::|        |:.|..:.:...|  .:.:|::.|..||..|:..|:.|||.|.|    
plant   847 IDFTYTIIPETRRILFSKVPETRKPLLSVEIDKVAQDFRIHRDEIYTKLVQIMRERLLAHLHGLP 911

  Fly   836 ---DAWEARPPIPSQTFRH---ISRHLVKLHEAIAGVLPEAQIHEIYGVVHRNFKDKLREQLLKL 894
               :.|...|....||...   ::|.:..||..::..|.||.:..|:..|......:..:.|..|
plant   912 KVVEGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQVISIIHTQTSQTLTNL 976

  Fly   895 NVNNNGGPQHGVVTSELTFYME-TLRTLKALPAEQLDN------GILEEIW 938
            .:::....:      .|..::| .|:.:::||::..:.      |.|:|.:
plant   977 EISSTEAKK------RLKLHVELILKCIRSLPSDNANQSDIPNWGQLDEFF 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scatNP_524905.1 Vps54 708..830 CDD:285206 46/138 (33%)
DUF4164 <810..867 CDD:290465 18/66 (27%)
VPS54NP_193684.4 Vps54 772..902 CDD:285206 46/129 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 80 1.000 Domainoid score I3006
eggNOG 1 0.900 - - E1_KOG2115
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5605
Inparanoid 1 1.050 245 1.000 Inparanoid score I1058
OMA 1 1.010 - - QHG55106
OrthoDB 1 1.010 - - D449680at2759
OrthoFinder 1 1.000 - - FOG0005108
OrthoInspector 1 1.000 - - oto3770
orthoMCL 1 0.900 - - OOG6_102785
Panther 1 1.100 - - LDO PTHR12965
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4728
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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