DRSC/TRiP Functional Genomics Resources

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Protein Alignment scat and crp.1

DIOPT Version :10

Sequence 1:NP_524905.1 Gene:scat / 47942 FlyBaseID:FBgn0011232 Length:940 Species:Drosophila melanogaster
Sequence 2:XP_002934127.2 Gene:crp.1 / 100494488 XenbaseID:XB-GENE-1018603 Length:238 Species:Xenopus tropicalis


Alignment Length:152 Identity:27/152 - (17%)
Similarity:53/152 - (34%) Gaps:45/152 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   777 NLALVSRALQLVLWLLPKLKEHFQAMSGYETIERDYQGHIKEIE-----------NKIHGIVSER 830
            :||..|.....:|:..|:..:||:...|    .||...::||..           :...|:|   
 Frog    70 SLATSSMDNDFLLFYCPQCDQHFEVSVG----GRDLSYNLKERNDAEWRSVCASWDSSSGVV--- 127

  Fly   831 LAAQLDAWEARPPIPSQTFRHISRHLV-------------------KLHEAIAGVLPEAQIHEIY 876
                 :.|....|.|.:.|:  ..|::                   .::::..|.:.:..:.:. 
 Frog   128 -----ELWINGKPYPRKVFQ--KGHVISKYPSIIIGQEQDGYGSNFNINQSFVGEISDIHVWDT- 184

  Fly   877 GVVHRNFKDKLREQLLKLNVNN 898
            .:.::|..|.|....|..||.|
 Frog   185 ALTYQNIFDVLTYNNLTGNVIN 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scatNP_524905.1 COG2 268..>418 CDD:473160
Vps54 708..829 CDD:462318 14/62 (23%)
DUF4164 <810..867 CDD:433450 12/86 (14%)
crp.1XP_002934127.2 LamG 20..217 CDD:473984 27/152 (18%)
Blue background indicates that the domain is not in the aligned region.

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