DRSC/TRiP Functional Genomics Resources

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Protein Alignment scat and vps54

DIOPT Version :9

Sequence 1:NP_524905.1 Gene:scat / 47942 FlyBaseID:FBgn0011232 Length:940 Species:Drosophila melanogaster
Sequence 2:XP_002939365.2 Gene:vps54 / 100380095 XenbaseID:XB-GENE-1013521 Length:981 Species:Xenopus tropicalis


Alignment Length:976 Identity:342/976 - (35%)
Similarity:500/976 - (51%) Gaps:163/976 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VCASLPL-DGVSDRDYDAHVAKYHVNQHTREMPPEWGVYSAAQNLPAVLNDPSRGK-QSNLFTKK 148
            ||...|. |..|.||..:.||..|          :|.:|::..||||.||||...| :|:.|||.
 Frog    42 VCPKEPTGDTKSLRDEPSVVADQH----------KWTIYNSKVNLPAALNDPRLAKRESDFFTKT 96

  Fly   149 WGEHFVERSHVPPSPRLPDITHADFTVYLGSIGKRYRWHERRQQ----QLERDKP-----LENGA 204
            ||:.||| |.|.|||.||.||...|..|......|.:.||:.:.    :::.|:|     |::.|
 Frog    97 WGQDFVE-SEVLPSPYLPAITKEQFLSYSQQTISREKNHEKCKSVCPLKVDFDRPAYSHVLKSRA 160

  Fly   205 QGAPGPGTGGQTPTHLSSVPEIFLKSQLQLHHPATFKQVFP-NYMQTSASSPESHQQTGRQLQEQ 268
            .              |..||:||:|....|....||..|.| ::..::.........:.:.|||:
 Frog   161 D--------------LEQVPKIFMKPDFALEDSLTFNAVLPWSHFSSAGGKGSRDAASSKLLQEK 211

  Fly   269 LSHYLDMVEVKIAQQVSQKSAAFFHAMTTQHAILAEMEQAADQVRQLRAALAELHSHSVVDSFKV 333
            ||||||:|||.||.|:|.:|.|||||||:||.:...:.:.:..|:.||..::::.......|.::
 Frog   212 LSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLRKTSQAVKMLRDKISQIDRVMCEGSLRI 276

  Fly   334 LRFAQRRQHYNLTLDKLRLMATVHKTQPMLQLLLGTQDYVAALDLIGTTQEILSAELLGIHCFKH 398
            ||.|..|.:.....:||:||||||:|||.:||||.|.:||.|||||.||||:|..||.|||.|:|
 Frog   277 LRQALTRNNCIKIYNKLKLMATVHQTQPTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRH 341

  Fly   399 LPMQLSEMEKLIDKMLTTEFERYAAADLNRPLTDALRETDSVCAEEDKLVAIVMGLLRKQNFSFV 463
            |..||.|||||||||:.:||..||.:||||||     |.||...||::||::|.|:|:::...|.
 Frog   342 LSSQLCEMEKLIDKMIISEFTSYARSDLNRPL-----EEDSHVVEEERLVSLVFGMLKQRKLDFF 401

  Fly   464 QAYQQEAIATIRAIIKQLLIEVLAR-SDSDQEISLTGHGEQALELTLPEWIALLQRSSQALVSIL 527
            :.|..|.:||.:.||||.::..::: .:.|.|: :|...:|...:...:|..|||.........:
 Frog   402 EIYSDEMMATAKNIIKQCVVNTVSQIEEIDSEV-VTKLTDQIRMMNFSQWFGLLQNIFSKFTIFI 465

  Fly   528 ERIKTVVGIMQQTADAAVGAQDAV----------NL-----IDSE-AFL---------------- 560
            ||:|..:.:::......:.....|          ||     :|:| |:|                
 Frog   466 ERVKATLSVIRNVVLMVLDKNQRVREMEMLAAQQNLRRESNVDNELAYLTHEGLFISDAFGEGEL 530

  Fly   561 -------------SPGHHE---------------------------------------------- 566
                         ||...|                                              
 Frog   531 PNAATSTNFQRNTSPSSSEPSGSDTVSDPECTTDSSSSKEHTLPSVTQGGIEIILTEEMKLTDLE 595

  Fly   567 --QLKNQLQQLLQAVCHYCHERCANIVSPQS----LERSSASEQELFQLSEIVDHFGETTRSICG 625
              ::.|.:|:||......||:||...:..::    ||:.:::  |...||..|:.|...|..|||
 Frog   596 LGKIANSIQELLYDASDICHDRCVKFLLARAKEGFLEKLNSA--EFVSLSRAVEAFVLGTEKICG 658

  Fly   626 VASVPLQLALKVQASRYAQRFHSERKQKLSLLLDQERWRQVDIPHEFQRIIERMAAGDYAKPEMG 690
            ..|:.|:.||:.||:::..|||.|||.|||||||.|||:|.|:|.|||.:::.:..|....||..
 Frog   659 RRSMSLRGALQSQANKFVNRFHDERKTKLSLLLDNERWKQADVPAEFQDLVDSIKDGKIVLPERK 723

  Fly   691 NLISNGA----GNPVLLVEGKQPYTLVSASLMLIRMLYEYGCSAHRLPLLASYHARNVVDLLRCF 751
               |.|.    ....|.|:| |.|.:|...|:|||::.||......:|.:.:.....:.|||:.|
 Frog   724 ---SGGTEERKPTDFLTVDG-QKYAVVGTVLLLIRIILEYCSCVDDIPSVTTDMLTRLSDLLKYF 784

  Fly   752 NSRSCQLIIGAGAMRVAGLKTITSTNLALVSRALQLVLWLLPKLKEHFQA---------MSGYET 807
            |||||||::||||::|.||||||:.||||.||.|||::..:|.::.||:|         :..::.
 Frog   785 NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPLIRAHFEARMQPKQYSMLRHFDH 849

  Fly   808 IERDYQGHIKEIENKIHGIVSERLAAQLDAWEARPPIPSQTFRHISRHLVKLHEAIAGVLPEAQI 872
            |.:||..||.||..|:..|:.......|..:|.:.|:||..||.|.:.:.|:||||..:|||.|.
 Frog   850 ITKDYNDHIAEISAKLVTIMDGLFEKLLSKYEVKAPVPSTCFRTICKQMAKMHEAIYDLLPEEQT 914

  Fly   873 HEIYGVVHRNFKDKLREQLLKLNVNNNGGPQHGVVTSELTFYMETLRTLKALPAEQLDNGILEEI 937
            ..::..::.::...||.||..|||.|:||||:|:|.:::.||.|.::.||.|  :.||.. |.||
 Frog   915 QTLFLKINSSYIFHLRRQLCHLNVINDGGPQYGLVAADIAFYTENVQALKGL--KDLDLS-LAEI 976

  Fly   938 W 938
            |
 Frog   977 W 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scatNP_524905.1 Vps54 708..830 CDD:285206 54/130 (42%)
DUF4164 <810..867 CDD:290465 21/56 (38%)
vps54XP_002939365.2 Vps54 741..871 CDD:369601 54/129 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 163 1.000 Domainoid score I3937
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5605
Inparanoid 1 1.050 551 1.000 Inparanoid score I1115
OMA 1 1.010 - - QHG55106
OrthoDB 1 1.010 - - D449680at2759
OrthoFinder 1 1.000 - - FOG0005108
OrthoInspector 1 1.000 - - oto102936
Panther 1 1.100 - - LDO PTHR12965
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1658
SonicParanoid 1 1.000 - - X4728
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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