DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dek and AT5G63550

DIOPT Version :9

Sequence 1:NP_652058.1 Gene:Dek / 47906 FlyBaseID:FBgn0026533 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001154794.1 Gene:AT5G63550 / 836474 AraportID:AT5G63550 Length:531 Species:Arabidopsis thaliana


Alignment Length:603 Identity:134/603 - (22%)
Similarity:235/603 - (38%) Gaps:173/603 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 SEKDEENSEDGDEPEDEADEKASDEESEKKKPKLDAEDKIKDATDESKPKSGADKPKKPEPKAKN 181
            :|..:|.:.:.:.|..|..:....||.|.:|.|:|: .:|.:|.:|.       |..:.|.:||.
plant     3 TETLDEKTPEVNSPAKEEIDVVPKEEKEVEKEKVDS-PRIGEAEEEK-------KEDEEEGEAKE 59

  Fly   182 GKVA-KEEDDDEEDEDDEDAEDDDG----DENDGLDKNNE------------------------- 216
            |::. |:::||.|.|::|:.|:..|    .|.:.:...:|                         
plant    60 GELGEKDKEDDVESEEEEEEEEGSGSKKSSEKETVTPTSERPTRERKKVERFSLSTPMRAPPSKS 124

  Fly   217 VAEDDENVVALAEIDRINENINKTRV-DGLQTLHAICFGAQGKNNVVKKNLRSFAGFEFAKDSAE 280
            |:.:......|.||..:...::|.:. |.|..||.|.||.:.|..:||:|:..|:||.:::...|
plant   125 VSIEKGRGTPLREIPNVAHKLSKRKADDNLMLLHTILFGKKAKAQMVKRNIGQFSGFAWSEKEEE 189

  Fly   281 YNKK--LEAIKKVDNKGLRSICEILTLDRKGS---KNETVLRVLKFLMEPDESLCLEQGDEEEEE 340
            ..:.  .|.|.|...:.|...|::|.:....|   |.|..::||:||..|.|:..:...|:|::.
plant   190 KQRARIKEKIDKCVKEKLIVFCDVLDIPISRSNVKKEELAVKVLEFLESPKETRDVIIADQEKQA 254

  Fly   341 DAEDEDLDEDEEDPPSEEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDFSSSDDSE 405
                               |||||                 .|:|..:|:        ||...::
plant   255 -------------------KKRKS-----------------TPKRGKSGE--------SSDTPAK 275

  Fly   406 QKVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGRPARKSRRRNSDSEE 470
            :|....||....|:|.|.|             .|.|.:.|...|.......|..:|....:|:::
plant   276 RKRQTKKRDLPSDTEEGKD-------------EGDADSEGTNDPHEEDDAAPEEESDHEKTDTDD 327

  Fly   471 EEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRRGR-----GRGAASRKRKDSDSEDEEVSED 530
            |::    :.:.:.|.:|:.|    .:.....|:|.:|:     .:|:|....|.|....:..|..
plant   328 EKD----EVEVEKPSKKKSS----SKKTVEESSGSKGKDKQPSAKGSARSGEKSSKQIAKSTSSP 384

  Fly   531 EEEEDVSDFASDQSEEERPKKSKKPITP-AKNSKANNKSKPAGKADSRSKKSKKESSE------- 587
            .:::.|     |..|..:.|..|:|..| ||.||...|:...|||  :::.::||..|       
plant   385 AKKQKV-----DHVESSKEKSKKQPSKPQAKGSKEKGKATKKGKA--KAEPTRKEMLEVVSKILK 442

  Fly   588 -----------------------------EDDDV---------DDKDESDEDEPLTKKGKQAFPT 614
                                         |..||         ||::|.:|:|......|:    
plant   443 EVDFNTATLSDILQKLSDHFGVELSHRKPEVKDVITEAINAMTDDEEEDEEEEAEAGSDKE---- 503

  Fly   615 DEQIRGYVKEILDKANLE 632
            .|:::|..:|  :||..|
plant   504 KEEVKGEEEE--EKAEAE 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DekNP_652058.1 RR_TM4-6 <70..>150 CDD:283990 8/32 (25%)
SAP 288..322 CDD:128789 10/36 (28%)
DEK_C 615..667 CDD:285919 6/18 (33%)
AT5G63550NP_001154794.1 DEK_C 431..481 CDD:285919 6/49 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 108 1.000 Domainoid score I2148
eggNOG 1 0.900 - - E1_KOG2266
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 116 1.000 Inparanoid score I2018
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004773
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13468
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3357
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.920

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