DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dek and dek

DIOPT Version :9

Sequence 1:NP_652058.1 Gene:Dek / 47906 FlyBaseID:FBgn0026533 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001007866.1 Gene:dek / 493252 XenbaseID:XB-GENE-941718 Length:388 Species:Xenopus tropicalis


Alignment Length:565 Identity:162/565 - (28%)
Similarity:230/565 - (40%) Gaps:212/565 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ASDEESEKKKPKLDAEDKIKDATDESKPKSGADKPKKPEPKAKNGKVAKEEDDDEEDEDDEDAED 202
            :||.||.....  :..::|::||:|           |....|:|||  :|::::||:||||:.:|
 Frog     2 SSDTESNALTK--EESEQIEEATEE-----------KMTDDAENGK--EEDEEEEEEEDDEEEDD 51

  Fly   203 DDGDEND---------------GLDKN---NEVAEDDENVVALAEIDRINENINKTRVDGLQTLH 249
            ||..|..               .|:.|   .|....:.....|.:|:|:...:.|.:.|.|:.||
 Frog    52 DDKKEKSLIVEGKREKKKVERLSLEMNISKKEFVLTEGKGQKLYDIERVQYFLRKKKCDELRPLH 116

  Fly   250 AICFGAQGKNNVVKKNLRSFAGFEFAKDSAEYNKKLEAIKKVDNKGLRSICEILTLDRKGSKNET 314
            .:.|...|..|:||||:..|.||.|.|||.:|.||.|.:||.....|::.|.:|.|::.||..|.
 Frog   117 RLLFNRLGIINLVKKNIGQFNGFPFEKDSEQYKKKEEMLKKWKKIDLKNTCGVLDLEKSGSNTEL 181

  Fly   315 VLRVLKFLMEPDESLCLEQGDEEEEEDAEDEDLDEDEEDPPSEEDKKRKSGKSSGGAGRGSARNS 379
            :.:::.|||||                                                    .|
 Frog   182 ISKIMNFLMEP----------------------------------------------------KS 194

  Fly   380 TGRPRRATAGKKMSAYVDFSSSDDSEQKVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAA 444
            ||:|...|.||.                   ||..:.|.|.|||                     
 Frog   195 TGKPLPKTKGKS-------------------PKASKKDRSSSGS--------------------- 219

  Fly   445 GRKVPSRGGRGRPARKSRRRNSDSEEEEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRRGRG 509
                         ||||:...|.....:||...|                               
 Frog   220 -------------ARKSKSNRSSVILSDESSSED------------------------------- 240

  Fly   510 RGAASRKRKDSDSEDEEVSEDEEEEDVSDFASDQSEEERPKKSKKPITPAKNSKANNKSKPAG-- 572
                  ::||.    ||.||:|:|.|        .|||.|||.      ||.:|:..||.|.|  
 Frog   241 ------EKKDK----EESSEEEKESD--------EEEEPPKKI------AKKAKSKPKSTPKGKK 281

  Fly   573 --------KADS--RSKKS----KKESSEEDDDVDDKDESDEDEPLTKKGKQAFPTDEQIRGYVK 623
                    ||||  .:|||    |||.:.:.:  .:.|:|.:||||.||.|:. ||||::|..||
 Frog   282 AAKSANVKKADSSTANKKSQGNAKKEKAVQSE--SESDDSSDDEPLIKKVKKP-PTDEELRETVK 343

  Fly   624 EILDKANLEEITMKTVCKQVYAKYPDFDLTDKKDFIKATVKALIA 668
            ::|.:|||||:|||.:||:|...||:.||..:|.|||:|||.||:
 Frog   344 KLLAEANLEEVTMKQICKKVNESYPNCDLFARKKFIKSTVKELIS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DekNP_652058.1 RR_TM4-6 <70..>150 CDD:283990 4/11 (36%)
SAP 288..322 CDD:128789 9/33 (27%)
DEK_C 615..667 CDD:285919 28/51 (55%)
dekNP_001007866.1 DEK_C 333..387 CDD:312337 30/53 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I12127
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1505933at2759
OrthoFinder 1 1.000 - - FOG0004773
OrthoInspector 1 1.000 - - oto102701
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3357
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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