DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dek and Dek

DIOPT Version :9

Sequence 1:NP_652058.1 Gene:Dek / 47906 FlyBaseID:FBgn0026533 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001004255.1 Gene:Dek / 306817 RGDID:1303246 Length:378 Species:Rattus norvegicus


Alignment Length:535 Identity:148/535 - (27%)
Similarity:213/535 - (39%) Gaps:190/535 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 DATDESKPKSGADKPKKPEPKAKNGKVAKEEDDDEEDEDDEDAEDDDGDEN----DGLDKNNEVA 218
            :..|...|.:...:|:.|.|        :||.::||:|||:|.::::..|.    :|..:..:|.
  Rat    10 EGEDTPTPPASEKEPEMPGP--------REESEEEEEEDDDDEDEEEEKEKSLIVEGKREKRKVE 66

  Fly   219 EDDENVVA---------------LAEIDRINENINKTRVDGLQTLHAICFGAQGKNNVVKKNLRS 268
            .....|.:               |.||:||:..::|.:.|.|:.||.:.:...|..:.:|||:..
  Rat    67 RLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSKKKTDELRNLHKLLYNRPGTVSSLKKNVGQ 131

  Fly   269 FAGFEFAKDSAEYNKKLEAIKKVDNKGLRSICEILTLDRKGSKNETVLRVLKFLMEPDESLCLEQ 333
            |:||.|.|.|.:|.||.|.:||..|..|:||||:|.|:|.|..:|.|.|:|.|||.|..|     
  Rat   132 FSGFPFEKGSTQYKKKEEMLKKYRNAMLKSICEVLDLERSGVNSELVKRILNFLMHPKPS----- 191

  Fly   334 GDEEEEEDAEDEDLDEDEEDPPSEEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDF 398
                                     .|.....|.|...|....|||:|..|::...|......|.
  Rat   192 -------------------------GKPLPKSKKSSSKGSKKERNSSGTTRKSKQTKCPEILSDE 231

  Fly   399 SSSDDSEQKVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGRPARKSRR 463
            ||||:.|                                                          
  Rat   232 SSSDEDE---------------------------------------------------------- 238

  Fly   464 RNSDSEEEEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEEVS 528
                                                               :|.||..|||||..
  Rat   239 ---------------------------------------------------KKNKDESSEDEEKE 252

  Fly   529 EDEEEEDVSDFASDQSEEERPKKSKKPITPAKNSKANNKSKPAGKADSRSKK-----SKKESSEE 588
            .:||:........::::::...||||.:          ||....||||.:.|     |||||..|
  Rat   253 SEEEQPPKKTSKKEKAKQKATTKSKKSV----------KSANVKKADSSTTKKNQNSSKKESGSE 307

  Fly   589 DDDVDDKDESDEDEPLTKKGKQAFPTDEQIRGYVKEILDKANLEEITMKTVCKQVYAKYPDFDLT 653
            |        |.:||||.||.|:. ||||:::..||::|..|||||:|||.:||:||..||.:|||
  Rat   308 D--------SSDDEPLIKKLKKP-PTDEELKETVKKLLADANLEEVTMKQICKEVYENYPAYDLT 363

  Fly   654 DKKDFIKATVKALIA 668
            ::|||||.|||.||:
  Rat   364 ERKDFIKTTVKELIS 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DekNP_652058.1 RR_TM4-6 <70..>150 CDD:283990
SAP 288..322 CDD:128789 16/33 (48%)
DEK_C 615..667 CDD:285919 30/51 (59%)
DekNP_001004255.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..65 15/58 (26%)
SAP 151..185 CDD:128789 16/33 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..329 16/142 (11%)
Nuclear localization signal. /evidence=ECO:0000255 207..223 3/15 (20%)
DEK_C 323..377 CDD:400903 5/53 (9%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335026
Domainoid 1 1.000 124 1.000 Domainoid score I5420
eggNOG 1 0.900 - - E1_KOG2266
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I4603
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1505933at2759
OrthoFinder 1 1.000 - - FOG0004773
OrthoInspector 1 1.000 - - oto95960
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13468
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3357
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.860

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