DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)03659 and YKR104W

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_013030.1 Gene:YKR104W / 853979 SGDID:S000001812 Length:306 Species:Saccharomyces cerevisiae


Alignment Length:315 Identity:134/315 - (42%)
Similarity:201/315 - (63%) Gaps:33/315 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1081 MTAVERVVEYESI--EPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVI 1143
            |::|||:.||..|  |..|.:      .||..||:.|::..|.|:|||:|:  :...|.::||.:
Yeast     1 MSSVERIKEYTDIPSESNGYI------SPPANWPQTGDVELKNLSLRYSPH--SSKALDNVSFKV 57

  Fly  1144 QPREKVGIVGRTGAGKSSLINALFRLS-YTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSG 1207
            :...||||||||||||||:|.|::||| :.:|::.||.:|.:.:.|..||..||.|||:|.||.|
Yeast    58 KAGTKVGIVGRTGAGKSSIIAAIYRLSDWENGTITIDNKDIKHIPLERLRNSISCIPQDPTLFDG 122

  Fly  1208 TMRYNLDPFDEYSDEKLWGCLEEVKLKEVVSDL--------PD-----------GLASKISEGGT 1253
            |:|.||||||.|||.:::|.|.:|.|.|...:|        |:           .|.:.:..||:
Yeast   123 TVRSNLDPFDRYSDVQIYGVLSKVGLIEECDELCLIFEQEQPNFSSHKLRNRFIDLNTVVKSGGS 187

  Fly  1254 NFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIID 1318
            |.|.|||||:||||::|....|:::|||||::|..:|..||.|||...::.|:|||||||.::||
Yeast   188 NLSQGQRQLLCLARSMLGARNIMLIDEATASIDYISDAKIQKTIRETMKNTTILTIAHRLRSVID 252

  Fly  1319 SDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLVNQSGRASYEGLLKIAQETFES 1373
            .||::||:.|||.|:..||.|::..:: :|:.|..|||  .:|.|.::|:.:|::
Yeast   253 YDKILVMEMGRVKEYDHPYTLISDRNT-IFYRLCRQSG--EFENLFELAKVSFDN 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 125/283 (44%)
ABC_membrane 171..437 CDD:294371
ABCC_MRP_domain1 499..699 CDD:213217
ABC_membrane 799..1045 CDD:294371
ABCC_MRP_domain2 1115..1336 CDD:213211 109/240 (45%)
YKR104WNP_013030.1 ABCC_NFT1 27..270 CDD:213269 111/244 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344667
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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