DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)03659 and MDL1

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_013289.1 Gene:MDL1 / 850885 SGDID:S000004178 Length:695 Species:Saccharomyces cerevisiae


Alignment Length:754 Identity:187/754 - (24%)
Similarity:304/754 - (40%) Gaps:182/754 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   716 TGLGSLSKTDKAKTEEQEPLNLNSPDNK----------NEVTPIKENSEQTV-----GGSSSGKE 765
            :.|.|.....|....::..:||..|..|          :::...|::::.|:     ...|||.:
Yeast    23 SALYSTKSLFKPPMYQKAEINLIIPHRKHFLLRSIRLQSDIAQGKKSTKPTLKLSNANSKSSGFK 87

  Fly   766 HVER------QESGGISLALYRKYFQAGGGLVAFLVMLSSSV-LAQVAVTGGDYFLTYWVKKEST 823
            .::|      .||         ||.    ||...|:::|||| :|..:|.|          |...
Yeast    88 DIKRLFVLSKPES---------KYI----GLALLLILISSSVSMAVPSVIG----------KLLD 129

  Fly   824 AAGHGEMEDME-SKSMDVYKYT---------LIIILSVIMNLSSSFLLFNIAKKASIRLHNTIFN 878
            .|...:.||.| |||..:|.:|         .:.|:..:.|.|...:|....::...||......
Yeast   130 LASESDGEDEEGSKSNKLYGFTKKQFFTALGAVFIIGAVANASRIIILKVTGERLVARLRTRTMK 194

  Fly   879 RVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVD-------------VMQIALWLAGIII 930
            .....|..|...|:.|.:::|.:.|.|.|.:.:...:.|             :|....|....::
Yeast   195 AALDQDATFLDTNRVGDLISRLSSDASIVAKSVTQNVSDGTRAIIQGFVGFGMMSFLSWKLTCVM 259

  Fly   931 VIANVNPLLLVPTLMLSVIFY--HLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALD 993
            :|       |.|.|....:.|  .:|||    ||.|:               .|:.|||      
Yeast   260 MI-------LAPPLGAMALIYGRKIRNL----SRQLQ---------------TSVGGLT------ 292

  Fly   994 AQRVLEKEFDSYQDAHSSAFFMYISTSQAFG--------YCMNCICVIYISI---ITLSFFAFPP 1047
              :|.|::.::.:            |.||:|        |......|.:|.:   :|...|.   
Yeast   293 --KVAEEQLNATR------------TIQAYGGEKNEVRRYAKEVRNVFHIGLKEAVTSGLFF--- 340

  Fly  1048 GNGADVGLVITQAM-GLI----DMVQWGVRQTAELENTMT------------------------A 1083
               ...|||...|| .|:    .|:|.|.....||.:.|.                        |
Yeast   341 ---GSTGLVGNTAMLSLLLVGTSMIQSGSMTVGELSSFMMYAVYTGSSLFGLSSFYSELMKGAGA 402

  Fly  1084 VERVVEYESIEPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREK 1148
            ..||.|....:|   |..|...|.|.:. .|..|:||.::..| |......:.|.|:..|:|.|.
Yeast   403 AARVFELNDRKP---LIRPTIGKDPVSL-AQKPIVFKNVSFTY-PTRPKHQIFKDLNITIKPGEH 462

  Fly  1149 VGIVGRTGAGKSSLINALFRLSYTD---GSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGT-- 1208
            |..||.:|:|||::.:.|.|  |.|   ||:.....|.|...|...||.|..:.|||:||:||  
Yeast   463 VCAVGPSGSGKSTIASLLLR--YYDVNSGSIEFGDEDIRNFNLRKYRRLIGYVQQEPLLFNGTIL 525

  Fly  1209 --MRYNLDPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILR 1271
              :.|.:.|.....|:::...:.:....:.:::.||||.:.:...|...|.||:|.:.||||.|.
Yeast   526 DNILYCIPPEIAEQDDRIRRAIGKANCTKFLANFPDGLQTMVGARGAQLSGGQKQRIALARAFLL 590

  Fly  1272 ENRILVMDEATANVDPQTDGLIQATIRSKF-RDCTVLTIAHRLHTIIDSDKVMVMDA-GRVVEFG 1334
            :..:|::||||:.:|.|::.::...::.:. |..|.::|||||.||..|.:|:|:.. |.|||.|
Yeast   591 DPAVLILDEATSALDSQSEEIVAKNLQRRVERGFTTISIAHRLSTIKHSTRVIVLGKHGSVVETG 655

  Fly  1335 SPYELMTKSDSKVFHNLVNQSGRASYEGLL----KIAQE 1369
            |..:|:...:|::...|..|.......|::    .:|:|
Yeast   656 SFRDLIAIPNSELNALLAEQQDEEGKGGVIDLDNSVARE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 181/722 (25%)
ABC_membrane 171..437 CDD:294371
ABCC_MRP_domain1 499..699 CDD:213217
ABC_membrane 799..1045 CDD:294371 59/282 (21%)
ABCC_MRP_domain2 1115..1336 CDD:213211 77/229 (34%)
MDL1NP_013289.1 MdlB 116..676 CDD:224055 160/628 (25%)
ABC_membrane 116..386 CDD:279056 69/331 (21%)
ABC_MTABC3_MDL1_MDL2 432..676 CDD:213216 81/246 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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