DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and ABCC1

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001031116.1 Gene:ABCC1 / 839920 AraportID:AT1G30400 Length:1622 Species:Arabidopsis thaliana


Alignment Length:1344 Identity:472/1344 - (35%)
Similarity:730/1344 - (54%) Gaps:107/1344 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 VNSENNSAQNEKEKVLPEN--PRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDI 133
            |.:||:.....:|....||  |...:|...|:.|.:..|:...|.::.|...|::......|::.
plant   206 VGTENSEDYEYEELPGGENICPERHANLFDSIFFSWLNPLMTLGSKRPLTEKDVWHLDTWDKTET 270

  Fly   134 LGNRLCASWERELKNDGRSPSLVRALLRVFG--------WQLG-----FPGLAIFVVELGLRTLQ 185
            |......||::||:..  .|.|:|||....|        |::|     |.|              
plant   271 LMRSFQKSWDKELEKP--KPWLLRALNNSLGGRFWWGGFWKIGNDCSQFVG-------------- 319

  Fly   186 PIFLVKLI-SYFSGEPDAANAGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRK 249
            |:.|.:|: |....||  |..|:.||::..|...|.|:........:..|.:::|.|:.:.:|||
plant   320 PLLLNELLKSMQLNEP--AWIGYIYAISIFVGVVLGVLCEAQYFQNVMRVGYRLRSALIAAVFRK 382

  Fly   250 ALRLTKGALGDTTSGHVVNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVL 314
            :||||........:|.:.||::.|...|.....::|.:|..|.:::|...|:||::|::::.|.|
plant   383 SLRLTNEGRKKFQTGKITNLMTTDAESLQQICQSLHTMWSAPFRIIVALVLLYQQLGVASIIGAL 447

  Fly   315 FMLLFMPIQMYLGTRTSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEM 379
            |::|..|||..:.::|..:..:..:|||.||.::||:::|:..:|.||||..|:..|...|:.|:
plant   448 FLVLMFPIQTVIISKTQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDEL 512

  Fly   380 NTIRQGQYIRGFDFARRIVLSRVAIFLSLVG---YVILGKVFTPEIAFMITAYYNVLLAAMSIYV 441
            :..|:.|.:..|:.   .:|:.:.:.:::|.   :.:||...||..||...:.::||...: ..:
plant   513 SWFRKAQLLSAFNM---FILNSIPVLVTVVSFGVFSLLGGDLTPARAFTSLSLFSVLRFPL-FML 573

  Fly   442 PSAIIQTAQFLTSIRRVEQFMQSEELGSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKA 506
            |:.|.|......|:.|:|:.:.:||     :...|:....||.|            |||||:...
plant   574 PNIITQMVNANVSLNRLEEVLSTEE-----RVLLPNPPIEPGQP------------AISIRNGYF 621

  Fly   507 KWDPNSPDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANS-GQLQVNGSLSYTSQE 570
            .||..:...|||.|||:|..||:|||:|.||.||:|||.|:||||.|.| ..:.:.||::|..|.
plant   622 SWDSKADRPTLSNINLDIPLGSLVAVVGSTGEGKTSLISAMLGELPARSDATVTLRGSVAYVPQV 686

  Fly   571 SWLFSGTVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLA 635
            ||:|:.|||.|||||.|.|.::||.|:...||:.|.:|||..|.|.:||||..:|||||.|:|:|
plant   687 SWIFNATVRDNILFGAPFDQEKYERVIDVTALQHDLELLPGGDLTEIGERGVNISGGQKQRVSMA 751

  Fly   636 RSVYRKASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQI 700
            |:||..:.:.:|||||||:||.|.:.:|::|::..|..:|.||||:|..||..||:|:::..|.:
plant   752 RAVYSNSDVCILDDPLSALDAHVGQQVFEKCIKRELGQTTRVLVTNQLHFLSQVDKILLVHEGTV 816

  Fly   701 KALGDYESLLKTG-----LITGLGSLSKTDKAKTEEQEPLNLNSPDNKNEVTPIKE---NSEQTV 757
            |..|.||.|..:|     |:...|        |.|:....|..:..::..|.|::.   |:.|..
plant   817 KEEGTYEELCHSGPLFQRLMENAG--------KVEDYSEENGEAEVDQTSVKPVENGNANNLQKD 873

  Fly   758 G----GSSSGKEHV---ERQESGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFLT 815
            |    .|..|...:   |.:|:|.:|..:..:|..|.||....::::...||.||.......:|:
plant   874 GIETKNSKEGNSVLVKREERETGVVSWKVLERYQNALGGAWVVMMLVICYVLTQVFRVSSSTWLS 938

  Fly   816 YWVKKESTAAGHGEMEDMESKSMDVYK--YTLIIILSVIMNLSSSFLLFNIAKKASIRLHNTIFN 878
            .|. ...|...||.:         .|.  |.|:....|.:.|.:|:.|...:..|:.::|:.:..
plant   939 EWT-DSGTPKTHGPL---------FYNIVYALLSFGQVSVTLINSYWLIMSSLYAAKKMHDAMLG 993

  Fly   879 RVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVIANVNPLLLVPT 943
            .:.||.|.||..|..|.|:|||.|||..:|..:.|.:...|.....|...:|:|..|:.|.|...
plant   994 SILRAPMVFFQTNPLGRIINRFAKDMGDIDRTVAVFVNMFMGSIAQLLSTVILIGIVSTLSLWAI 1058

  Fly   944 LMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDAQRVLEKEFDSYQDA 1008
            :.|.|:||.....|..|||::||:::..|||||:....:||||::|||..|...:.:......|.
plant  1059 MPLLVVFYGAYLYYQNTSREIKRMDSTTRSPVYAQFGEALNGLSSIRAYKAYDRMAEINGRSMDN 1123

  Fly  1009 HSSAFFMYISTSQAFGYCMNCICVIYISIITLSFFAFPPGNGAD-------VGLVITQAMGLIDM 1066
            :.....:.::.::..|..:..:..:.: .:|.|......|..|:       :||:::.|:.:...
plant  1124 NIRFTLVNMAANRWLGIRLEVLGGLMV-WLTASLAVMQNGKAANQQAYASTMGLLLSYALSITSS 1187

  Fly  1067 VQWGVRQTAELENTMTAVERVVEYESIEPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRYTPNAK 1131
            :...:|..:..||::.:||||..|..|..|..| ..::.:||..||..|.|.|:::.|||.|  :
plant  1188 LTAVLRLASLAENSLNSVERVGNYIEIPSEAPL-VIENNRPPPGWPSSGSIKFEDVVLRYRP--E 1249

  Fly  1132 AENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRL-SYTDGSVLIDTRDTRQMGLHDLRRQI 1195
            ...||..:||:|.|.:|||||||||||||||:|||||: ....|.:|||..|..:.||.|||:.:
plant  1250 LPPVLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRKVL 1314

  Fly  1196 SIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQR 1260
            .||||.|||||||:|:|||||.|::|..||..||...||:.:...|.||.::::|.|.|||||||
plant  1315 GIIPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEVTEAGENFSVGQR 1379

  Fly  1261 QLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVM 1325
            ||:.||||:||.::|||:|||||.||.:||.|||.|||.:|:.||:|.|||||:||||.|||:|:
plant  1380 QLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRLNTIIDCDKVLVL 1444

  Fly  1326 DAGRVVEFGSPYELMTKSDSKVFHNLVNQSGRASYEGLLKIAQE 1369
            |:|:|.||.||..|::..:|. |..:|..:|.|:.|.|..|..|
plant  1445 DSGKVQEFSSPENLLSNGESS-FSKMVQSTGTANAEYLRSITLE 1487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 458/1298 (35%)
ABC_membrane 171..437 CDD:294371 75/269 (28%)
ABCC_MRP_domain1 499..699 CDD:213217 100/200 (50%)
ABC_membrane 799..1045 CDD:294371 68/247 (28%)
ABCC_MRP_domain2 1115..1336 CDD:213211 128/221 (58%)
ABCC1NP_001031116.1 PLN03130 1..1622 CDD:215595 472/1344 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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