Sequence 1: | NP_001260823.1 | Gene: | l(2)03659 / 47905 | FlyBaseID: | FBgn0010549 | Length: | 1374 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113948.1 | Gene: | Abcb11 / 83569 | RGDID: | 619930 | Length: | 1321 | Species: | Rattus norvegicus |
Alignment Length: | 1311 | Identity: | 309/1311 - (23%) |
---|---|---|---|
Similarity: | 543/1311 - (41%) | Gaps: | 301/1311 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 205 AGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRV----------AMGSMIFRKALRLTKGALG 259
Fly 260 DTTSGHVVNLISNDIPRLDS--APYTVHYL-----------------WVGPLQVLVITYLMYQEI 305
Fly 306 GI-SAVFGVLFMLLFMPIQMYLGTRTSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQ 369
Fly 370 MVTHAREKEMNTIRQGQYIRGFDFARRIVLSRVAIFLSLVGYVILGKVFTPEIAF---------- 424
Fly 425 -------MITAYYNVLLAAMSIYVPSAIIQTAQFLTSIRRVEQFMQSEELGSSDKSEGPSKDTVP 482
Fly 483 GNPPSNNNEADLLKSAISIRDLKAKWDPNSPDY-TLSGINLEIKPGSVVAVIGLTGSGKSSLIQA 546
Fly 547 ILGELKANSGQLQVNG-------------SLSYTSQESWLFSGTVRQNILFGQPMDSQRYEEVVK 598
Fly 599 --KCALERDFDL-LPLRDNTIVGERGATLSGGQKARISLARSVYRKASIYLLDDPLSAVD-ASVA 659
Fly 660 R--HLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALGDYESLL------------ 710
Fly 711 ---------KTGLI----TGLGSLSKT-------------DKAKTEEQEPLNLNSP-----DNKN 744
Fly 745 EVTPIKENSEQTVGGSSSGKEHVERQESGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQV--AV 807
Fly 808 TGGDYFLTYWVKKESTAAGHGEMEDMESKSMDVYKYTLIIILSVIMNLSSSFLL-FNIAKKASI- 870
Fly 871 --RLHNTIFNRVTRADMHFFS--INKHGSILNRFTKDMSQV-----DEVLPVV-----LVDVMQI 921
Fly 922 AL---WLAGIIIVIANVNPLL----LVPTLMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHL 979
Fly 980 AASLNGLTTIRALDAQRVLEKEFD-SYQDAHSSAFFMYISTSQAFGYCMNCICVIYISIITLSFF 1043
Fly 1044 AFPPG-----NGADVG----LVITQAMGLIDMVQWGVRQTAELENTMTAVERVVEYESIEPEGML 1099
Fly 1100 EAPD-----DKKPP--------KTWPE-QGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVG 1150
Fly 1151 IVGRTGAGKSSLINALFRLSYTD-GSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNL- 1213
Fly 1214 --DPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRIL 1276
Fly 1277 VMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMT 1341
Fly 1342 KSDSKVFHNLV 1352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l(2)03659 | NP_001260823.1 | CFTR_protein | 89..1343 | CDD:273530 | 307/1300 (24%) |
ABC_membrane | 171..437 | CDD:294371 | 52/278 (19%) | ||
ABCC_MRP_domain1 | 499..699 | CDD:213217 | 67/219 (31%) | ||
ABC_membrane | 799..1045 | CDD:294371 | 54/271 (20%) | ||
ABCC_MRP_domain2 | 1115..1336 | CDD:213211 | 76/224 (34%) | ||
Abcb11 | NP_113948.1 | PTZ00265 | 150..1314 | CDD:240339 | 304/1295 (23%) |
Interaction with HAX1. /evidence=ECO:0000269|PubMed:15159385 | 651..674 | 1/22 (5%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |