DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and ABCC14

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_191829.1 Gene:ABCC14 / 825444 AraportID:AT3G62700 Length:1539 Species:Arabidopsis thaliana


Alignment Length:1358 Identity:426/1358 - (31%)
Similarity:711/1358 - (52%) Gaps:121/1358 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LTVNSENNSAQNEKEKVLPENPR-----ARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEE 128
            :.|.:.|.:|..:...|:.|...     |.::|||...:.:..|:.||||:..|:...:.....|
plant   223 VVVTTSNVTAPAKSNDVVVEKSENVSLYASASFISKTFWLWMNPLLRKGYKSPLNLDQVPTLSPE 287

  Fly   129 QKSDILGNRLCASWERELKNDGRSPSLVR-ALLRVFGWQLGFPGLAIFVVELGLRTLQPIFLVKL 192
            .:::.|.....:.|.:..:| .|:|  || .|:|.|..::.|..: :.::.|.:..:.|:.:...
plant   288 HRAEKLATLFESKWPKPQEN-SRNP--VRTTLIRCFWKEIAFTAV-LAIIRLSVIYVGPVLIQSF 348

  Fly   193 ISYFSGEPDAANAGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGA 257
            :.:.||:..:.:.|:|..:..::...:.|:......|....:...:|..:.:.:::|.|:||..|
plant   349 VDFTSGKRSSPSQGYYLVLILLIAKFVEVLSTHQFNFNSQKLGMLIRSTLITALYKKGLKLTGSA 413

  Fly   258 LGDTTSGHVVNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIG---ISAVFGVLFMLLF 319
            ..:...|.:||.::.|..:|......:|.:|:.||||.....|:|..:|   ::.|.|:..:.:|
plant   414 RQNHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQVAAAIVLLYNTLGPSVVTTVIGLTGIFVF 478

  Fly   320 MPIQMYLGT-RTSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIR 383
                :.||| |.:..|.......|:|::..||:::.::|:|..|||..|.:.:...||.|...:.
plant   479 ----ILLGTKRNNRYQFSLMMNRDSRMKATNEMLNYMRVIKFQAWEDHFNERILKFREMEFGWLS 539

  Fly   384 QGQY-IRGFDFARRIVLSRVAIFLSLVGY---VILGKVFTPEIAFMITAYYNVLLAAMSIYVPSA 444
            :..| |.|    ..|||....:.:|.:.:   |.||........|..|..:.:|...:..: |.:
plant   540 KFLYSIAG----NIIVLWSTPVLISALTFTTAVFLGVKLDAGTVFTTTTIFKILQEPIRTF-PQS 599

  Fly   445 IIQTAQFLTSIRRVEQFMQSEELGSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWD 509
            :|..:|.:.|:.|::.:|.|.||         |::||..:...:.|      .|:.|:|....||
plant   600 MISLSQAMISLGRLDAYMMSREL---------SEETVERSQGCDGN------VAVEIKDGSFSWD 649

  Fly   510 PNSPDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLF 574
            ....:..:..||.|:|.|.:.|::|..|||||||:.::|||:...||:::|.|:.:|.:|.||:.
plant   650 DEDDEPAIENINFEVKKGELAAIVGTVGSGKSSLLASVLGEMHKLSGKVRVCGTTAYVAQTSWIQ 714

  Fly   575 SGTVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVY 639
            :|||:.|||||.||:..:|.||:|.|.||:|..::...|.|.:||||..||||||.||.|||:||
plant   715 NGTVQDNILFGLPMNRSKYNEVLKVCCLEKDMQIMEFGDQTEIGERGINLSGGQKQRIQLARAVY 779

  Fly   640 RKASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALG 704
            :::.:|||||..|||||.....:|.:||||.|:|.|::|||||..||.:||:|:::.:|.|...|
plant   780 QESDVYLLDDVFSAVDAHTGSDIFKKCVRGALKGKTILLVTHQVDFLHNVDRILVMRDGMIVQSG 844

  Fly   705 DYESLLKTGLITG--------------LGSLSKT----DKAKTEEQEPLNLNSP----------- 740
            .|:.|:.:||..|              .||.|.|    ..|....|..:::.||           
plant   845 KYDELVSSGLDFGELVAAHETSMELVEAGSASATAANVPMASPITQRSISIESPRQPKSPKVHRT 909

  Fly   741 ----------DNKNEVTPIKENSEQTV----------GGSSSGKEHVERQESGGISLALYRKYFQ 785
                      ....|...:.|.:::::          .||...||  |.:|.|.:|..:|:.|..
plant   910 TSMESPRVLRTTSMESPRLSELNDESIKSFLGSNIPEDGSRLIKE--EEREVGQVSFQVYKLYST 972

  Fly   786 AGGGLVAFLVMLSSSVLAQVAVTGGDYFLTYWVKKESTAAGHGEMEDMESKSMDVYKYTLIIILS 850
            ...|....::::..||..|.::...||:|.|    |::|......:    .::.:..|.:|..:|
plant   973 EAYGWWGMILVVFFSVAWQASLMASDYWLAY----ETSAKNEVSFD----ATVFIRVYVIIAAVS 1029

  Fly   851 VIMNLSSSFLLFNIAKKASIRLHNTIFNRVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVL 915
            :::....:|.:.::..|.:......|.|.:..|.|.||.....|.||:|.:.|.:.||..:|.::
plant  1030 IVLVCLRAFYVTHLGLKTAQIFFKQILNSLVHAPMSFFDTTPSGRILSRASTDQTNVDIFIPFMI 1094

  Fly   916 VDVMQIALWLAGIIIVIANV---NPLLLVPTLMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYS 977
            ..|..:...|..|.||....   ....::|...|::.:   |..||.:||:|.|:::|.::||..
plant  1095 GLVATMYTTLLSIFIVTCQYAWPTVFFIIPLGWLNIWY---RGYYLASSRELTRLDSITKAPVIH 1156

  Fly   978 HLAASLNGLTTIRALDAQRVLEKEFDSYQDAHSSAFFMYISTSQAFGYCMNCI-----CVIYISI 1037
            |.:.|:.|:.||||...|.:..:|.....:|:....|....:::..|:.:..|     |:..:.:
plant  1157 HFSESIAGVMTIRAFKKQPMFRQENVKRVNANLRMDFHNNGSNEWLGFRLELIGSWVLCISALFM 1221

  Fly  1038 ITLSFFAFPPGNGADVGLVITQAMGLIDMVQWGVRQTAELENTMTAVERVVEYESIEPEGMLEAP 1102
            :.|......|.|   |||.::..:.|..::.|.:..:..:||.|.:|||:.::..|..|...|. 
plant  1222 VMLPSNIIKPEN---VGLSLSYGLSLNGVLFWAIYLSCFIENKMVSVERIKQFTDIPAEAKWEI- 1282

  Fly  1103 DDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALF 1167
            .:.:||..||.:|.|..:::.:||.||...  |||.|:..|:..||:|:|||||:|||:||..||
plant  1283 KESRPPPNWPYKGNIRLEDVKVRYRPNTPL--VLKGLTIDIKGGEKIGVVGRTGSGKSTLIQVLF 1345

  Fly  1168 RL-SYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCLEEV 1231
            || ..:.|.::||..|...:||||||.:..|||||||||.||:|.|:||.::||||::|..||..
plant  1346 RLVEPSGGKIIIDGIDICTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEKYSDEEIWKSLERC 1410

  Fly  1232 KLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQAT 1296
            :||:||:..|:.|.|.:::.|.|:|||||||:||.|.:|:.:|||.:|||||:||.|||.:||..
plant  1411 QLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMIQKI 1475

  Fly  1297 IRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLVNQ 1354
            ||..|.|||:::||||:.|::|.|:|:|:|||:..|:.||..|:.:  ..:|..||.:
plant  1476 IREDFSDCTIISIAHRIPTVMDCDRVLVIDAGKAKEYDSPVRLLER--QSLFAALVQE 1531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 418/1325 (32%)
ABC_membrane 171..437 CDD:294371 62/273 (23%)
ABCC_MRP_domain1 499..699 CDD:213217 94/199 (47%)
ABC_membrane 799..1045 CDD:294371 60/253 (24%)
ABCC_MRP_domain2 1115..1336 CDD:213211 114/221 (52%)
ABCC14NP_191829.1 MRP_assoc_pro 142..1534 CDD:188098 426/1358 (31%)
ABC_membrane 329..593 CDD:294371 62/272 (23%)
ABCC_MRP_domain1 639..838 CDD:213217 94/198 (47%)
ABC_membrane 984..1252 CDD:294371 67/281 (24%)
ABCC_MRP_domain2 1295..1515 CDD:213211 114/221 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3649
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

Return to query results.
Submit another query.