DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and ABCC8

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001326629.1 Gene:ABCC8 / 821679 AraportID:AT3G21250 Length:1470 Species:Arabidopsis thaliana


Alignment Length:1397 Identity:452/1397 - (32%)
Similarity:712/1397 - (50%) Gaps:164/1397 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLENNGFDHRNKDESLSVNTSPP----LVCRKCFELGHQTENCKQKLTVNSENNSAQN-----EK 82
            ||:.||.      ..|.:.|.|.    |:|              ..:.:.|.:.:||:     ..
plant   150 LLQGNGI------RILDILTLPMSLLLLLC--------------SWMNLRSSSAAAQDCSVTGLS 194

  Fly    83 EKVLPENPR------ARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCAS 141
            :.:|.:|||      |.:.|.|.|.|.:..|:...|::|.|...|:...:.|.::.:...:...:
plant   195 DPLLTKNPRKESARLATAGFFSILSFSWMNPLLSLGFKKPLSPEDIPSVVPEDEAQLAYKKFSQA 259

  Fly   142 WERELKNDG--RSPSLV-RALLRVFGWQLGFPGLAIFVVELGLRTLQ----PIFLVKLISYFSGE 199
            |:..|.::.  :..:|| ||:::|:..:..|  :|:|..   |||..    |:.|...:.|.:.:
plant   260 WDTLLGDESSTKERNLVFRAVVKVYFKENIF--IAVFAF---LRTFAVVSLPLMLYVFVDYANSD 319

  Fly   200 PDAANAGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGALGDTTSG 264
            ......||:.....:::..:..:.:....|.......::|.|:....::|.|:|:.......:||
plant   320 HRDLRNGFFNLACLVMLKLVESLTMRHWYFASRRSGMRIRSALMVAAYKKQLKLSSLGRKRHSSG 384

  Fly   265 HVVNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTR 329
            .:||.|:.|..|:....:..|..|...||:|:.|.:::..:|..|..|::.:||...:.:.....
plant   385 EIVNYIAVDAYRMGEFLWWFHSGWSLSLQLLLSTAVLFGVVGAGAFPGLILLLLCGLLNLPFAKM 449

  Fly   330 TSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYIRGFD-- 392
            ....|.:.....|.|:|..:||:::::|:|:.:||..|::.:...|:.|...:.:.|..:.|.  
plant   450 LQNCQTQFMIAQDKRLRSTSEILNSMKVIKLQSWEDEFKKKIESCRDDEFTWLAKAQLTKAFGSF 514

  Fly   393 ---FARRIVLSRVAIFLSLVGYVILGKV-FTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLT 453
               .:..||.|  .:||   |..:|... ......|.:.|...|:...:.| :|.||....|...
plant   515 LYWMSPTIVSS--VVFL---GCALLKSAPLNASTIFTVLATLRVMSEPVKI-IPDAISAIIQGNV 573

  Fly   454 SIRRVEQFMQSEELGSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWDPNSPDYTLS 518
            |.:|:..|:..:|| ..|:.|              .:..|...:|:.|:.....|:|.:...||.
plant   574 SFQRLNNFLLDDEL-KMDEIE--------------RSGLDASGTAVDIQVGNFGWEPETKIPTLR 623

  Fly   519 GINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLFSGTVRQNIL 583
            .|:||||.|..|||.|..|:|||||:.|:|||:...||.::|.||::|.||.||:.|||:|.|||
plant   624 NIHLEIKHGQKVAVCGPVGAGKSSLLHAVLGEIPKVSGTVKVFGSIAYVSQTSWIQSGTIRDNIL 688

  Fly   584 FGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVYRKASIYLLD 648
            :|:||:|:||...:|.|||::|.:.....|.|.:|:||..||||||.||.|||:||..|.:||||
plant   689 YGKPMESRRYNAAIKACALDKDMNGFGHGDLTEIGQRGINLSGGQKQRIQLARAVYADADVYLLD 753

  Fly   649 DPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALGDYESLLKTG 713
            ||.|||||..|..||.:||...|:..||:|||||.:||..||||:::..|.|...|.||.||..|
plant   754 DPFSAVDAHTAGVLFHKCVEDSLKEKTVILVTHQVEFLSEVDQILVMEEGTITQSGKYEELLMMG 818

  Fly   714 ------------LIT--------GLGSLSKTDKAKTEEQEPLNLNSPDNKNEVTPIKENSEQT-V 757
                        .:|        .||.|.|..|    ::|..|:      ..|..|:|..|:| :
plant   819 TAFQQLVNAHNDAVTVLPLASNESLGDLRKEGK----DREIRNM------TVVEKIEEEIEKTDI 873

  Fly   758 GGSSSGKEHVERQESGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFLTYWVKKES 822
            .|....:|  |.:|||.:.:..:..|.....|    ..:|.||||.||.........|||:    
plant   874 PGVQLTQE--EEKESGYVGMKPFLDYIGVSRG----WCLLWSSVLGQVGFVVFQAASTYWL---- 928

  Fly   823 TAAGHGEMEDMESKSMDVYKYT---LIIILSVIMNLSSSFL------LFNIAKKASIRLHNTIFN 878
                        :.::.:.|.|   ||.:.|:|..||:.|:      ..::..|||....:...|
plant   929 ------------AFAIGIPKITNTMLIGVYSIISTLSAGFVYARAITTAHLGLKASKAFFSGFTN 981

  Fly   879 RVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVIANVNPLLLVPT 943
            .|.:|.|.||.....|.||.|.:.|::.:|..:|...:.|:..|:.|...::::..|...:::..
plant   982 AVFKAPMLFFDSTPVGRILTRASSDLNVLDYDVPFAFIFVVAPAVELTAALLIMTYVTWQVIIIA 1046

  Fly   944 LMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDAQRVLEKEFDSYQDA 1008
            |:.......:::.||.::|:|.|:....::||.::.|.:..|:.||||........|.:.:..||
plant  1047 LLALAATKVVQDYYLASARELIRINGTTKAPVMNYAAETSLGVVTIRAFGTAERFFKNYLNLVDA 1111

  Fly  1009 HSSAFFMYISTSQAFGYCMNCI----------CVIYISIITLSFFAFPPGNGADVGLVITQAMGL 1063
            .:..||:   ::.|..:.:..|          |.:.:.:|...:.|  ||.   |||.::.|:.|
plant  1112 DAVLFFL---SNAAMEWVILRIETLQNVTLFTCALLLILIPKGYIA--PGL---VGLSLSYALTL 1168

  Fly  1064 IDMVQWGVRQTAELENTMTAVERVVEYESI--EPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRY 1126
            .....:..|....|.|::.:|||:.:|.:|  ||..::   |||:||.:||..|.|..:||.:||
plant  1169 TQTQVFLTRWYCTLSNSIISVERIKQYMNIPEEPPAII---DDKRPPSSWPSNGTIHLQELKIRY 1230

  Fly  1127 TPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRL-SYTDGSVLIDTRDTRQMGLHD 1190
            .|||..  |||.:|...:...:||:|||||:|||:||:||||| ....|.:|||..|..::||.|
plant  1231 RPNAPL--VLKGISCTFREGTRVGVVGRTGSGKSTLISALFRLVEPASGCILIDGIDISKIGLKD 1293

  Fly  1191 LRRQISIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNF 1255
            ||.::|||||||.||.|.:|.||||...|||:::|..||:.:||..:|:||:.|.|.:|:.|.|:
plant  1294 LRMKLSIIPQEPTLFRGCIRTNLDPLGVYSDDEIWKALEKCQLKTTISNLPNKLDSSVSDEGENW 1358

  Fly  1256 SVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSD 1320
            |||||||.||.|.:|:.|:|||:|||||::|..||.:||..||.:|.||||:|:|||:.|:||||
plant  1359 SVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRVPTVIDSD 1423

  Fly  1321 KVMVMDAGRVVEFGSPYELMTKSDSKVFHNLV 1352
            .|||:..|.:||:..|.:|| ::|| .|..||
plant  1424 MVMVLSFGDLVEYNEPSKLM-ETDS-YFSKLV 1453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 434/1315 (33%)
ABC_membrane 171..437 CDD:294371 59/275 (21%)
ABCC_MRP_domain1 499..699 CDD:213217 102/199 (51%)
ABC_membrane 799..1045 CDD:294371 61/264 (23%)
ABCC_MRP_domain2 1115..1336 CDD:213211 118/221 (53%)
ABCC8NP_001326629.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3649
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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