DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and ABCC6

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_187916.3 Gene:ABCC6 / 820497 AraportID:AT3G13090 Length:1466 Species:Arabidopsis thaliana


Alignment Length:1354 Identity:439/1354 - (32%)
Similarity:677/1354 - (50%) Gaps:144/1354 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GHQTENCKQKLTVNSENNSAQNEKEKVLPENPRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLY 123
            |.:.:..|:.|..::|  |:.||:...    |.:::..:|.:.|.:..|:...|..|.:|..|: 
plant   183 GERIDLLKEPLLSSAE--SSDNEEVTA----PFSKAGILSRMSFSWMSPLITLGNEKIIDIKDV- 240

  Fly   124 RPLEEQKSD-------ILGNRLCASWERELKNDGR----SPSLVRALLRVFGWQLGFPGLAIFVV 177
             | :..:||       |..::|  .|:     ||.    :..|::||.......:....|..||.
plant   241 -P-QLDRSDTTESLFWIFRSKL--EWD-----DGERRITTFKLIKALFLSVWRDIVLSALLAFVY 296

  Fly   178 ELGLRTLQPIFLVKLISYFSGEPDAANAGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAM 242
            .:.. .:.|..:...:.|.:|.....|.|:.......|...:.........|........||..:
plant   297 TVSC-YVAPYLMDNFVQYLNGNRQYKNQGYVLVTTFFVAKLVECQTQRQWFFRGQKAGLGMRSVL 360

  Fly   243 GSMIFRKALRLTKGALGDTTSGHVVNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGI 307
            .|||:.|.|.|...:....|||.::||::.|..|:.:..:.:|..|:..|||.:..:::|:.:|:
plant   361 VSMIYEKGLTLPCHSKQGHTSGEIINLMAVDADRISAFSWFMHDPWILVLQVSLALWILYKSLGL 425

  Fly   308 SAVFGVLFMLLFMPIQMYLGTRTSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVT 372
            .::......:|.|.............|....:..|||::..:|::..:::||:..||..|...:.
plant   426 GSIAAFPATILVMLANYPFAKLEEKFQSSLMKSKDNRMKKTSEVLLNMKILKLQGWEMKFLSKIL 490

  Fly   373 HAREKEMNTIRQGQY----IRGFDFARRIVLSRVAIFLSLVGYVIL--GKVFTPEIAFMITAYYN 431
            ..|..|...:::..|    |....:|....:|..|....|:..:.|  ||:......|.|     
plant   491 ELRHIEAGWLKKFVYNSSAINSVLWAAPSFISATAFGACLLLKIPLESGKILAALATFRI----- 550

  Fly   432 VLLAAMSIYVPSAIIQTAQFLTSIRRVEQFMQSEELGSSDKSEGPSKDTVPGNPPSNNNEADLLK 496
              |......:|..|....|...|:.|:..|:..::|          :..|.|..||.::|     
plant   551 --LQGPIYKLPETISMIVQTKVSLNRIASFLCLDDL----------QQDVVGRLPSGSSE----- 598

  Fly   497 SAISIRDLKAKWDPNSPDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVN 561
            .|:.|.:....||.:||..||..:|.::..|..||:.|..|||||||:.:||||:...||.|:|.
plant   599 MAVEISNGTFSWDDSSPIPTLRDMNFKVSQGMNVAICGTVGSGKSSLLSSILGEVPKISGNLKVC 663

  Fly   562 GSLSYTSQESWLFSGTVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSG 626
            |..:|.:|..|:.||.|.:|||||:||:.:.|:.|::.|:|.:|.::||..|.|::||||..|||
plant   664 GRKAYIAQSPWIQSGKVEENILFGKPMEREWYDRVLEACSLNKDLEILPFHDQTVIGERGINLSG 728

  Fly   627 GQKARISLARSVYRKASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQ 691
            |||.||.:||::|:.|.|||.|||.|||||....|||.:.:.|.||..||:.||||.:|||..|.
plant   729 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRHKTVIYVTHQVEFLPEADL 793

  Fly   692 IVILANGQIKALGDYESLLKTGL----ITG-----LGSLSKTDKAKTEEQEPLNLNSPDNKNEVT 747
            |:::.:|:|...|.|..:|.:|.    :.|     |.::...:.....|:     ::.|.:|||.
plant   794 ILVMKDGKITQAGKYHEILDSGTDFMELVGAHTEALATIDSCETGYASEK-----STTDKENEVL 853

  Fly   748 PIKENSEQTVGGSSSGK-EHVERQESGGISLALYRKYFQ-AGGGLVAFLVMLSSSVLAQVAVTGG 810
            ..||..|.......||: ...|.:|.|.:...:|:||.. |.||.|..|::: ..||.|:...|.
plant   854 HHKEKQENGSDNKPSGQLVQEEEREKGKVGFTVYKKYMALAYGGAVIPLILV-VQVLFQLLSIGS 917

  Fly   811 DYFLTYWVKKESTAAGHGEMEDMESKSMDVYKYTLIIILSVIMNLSSSFLL-----------FNI 864
            :|::| ||...|        :|:|.   .|..:|||::. |::.::|||.:           |.:
plant   918 NYWMT-WVTPVS--------KDVEP---PVSGFTLILVY-VLLAVASSFCILIRALLVAMTGFKM 969

  Fly   865 AKKASIRLHNTIFNRVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGII 929
            |.:...::|..||    ||.|.||.....|.||||.:.|.|..|..||.....|...|:.:.|||
plant   970 ATELFTQMHLRIF----RASMSFFDATPMGRILNRASTDQSVADLRLPGQFAYVAIAAINILGII 1030

  Fly   930 IVIANVNPLLLVPTLMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDA 994
            .||..|...:|:..:.:.......|..|:..:|:|.|:..|:||||..|.:.:|:|:||||:.|.
plant  1031 GVIVQVAWQVLIVFIPVVAACAWYRQYYISAARELARLAGISRSPVVHHFSETLSGITTIRSFDQ 1095

  Fly   995 QRVLEKEFDSYQDAHSSAFFMYISTSQAFGYCMNCICVIYISIITLSFFAF----------PPG- 1048
            :.....:.....|.:|...|.  ||.     .|..:|   ..:..||.|||          |.| 
plant  1096 EPRFRGDIMRLSDCYSRLKFH--STG-----AMEWLC---FRLELLSTFAFASSLVILVSAPEGV 1150

  Fly  1049 -NGADVGLVITQAMGLIDMVQWGVRQTAELENTMTAVERVVEYESI--EPEGMLEAPDDKKPPKT 1110
             |.:..||.||.|:.|..:....:....:|||.|.:|||:::|.:|  ||..::|.   .:|.|:
plant  1151 INPSLAGLAITYALNLNTLQATLIWTLCDLENKMISVERMLQYTNIPSEPPLVIET---TRPEKS 1212

  Fly  1111 WPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRL-SYTDG 1174
            ||.:|||....|.:||.|:...  ||..|:.......|.|||||||.|||:||..|||: ....|
plant  1213 WPSRGEITICNLQVRYGPHLPM--VLHGLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVEPAAG 1275

  Fly  1175 SVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCL------EEVKL 1233
            .:.||..:...:||||||.::|||||:|.:|.||:|.||||.:||:|:::|..|      :||:.
plant  1276 EIRIDGINILSIGLHDLRSRLSIIPQDPTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRK 1340

  Fly  1234 KEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIR 1298
            ||:..|.|      :||.|.|:||||||||||.|.:|:.:::||:|||||::|..||.|||.|:|
plant  1341 KELKLDSP------VSENGQNWSVGQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLR 1399

  Fly  1299 SKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLV 1352
            ..|.||||:|||||:.::||||.|:::|.|.:.|..||..|: :..|.:|..||
plant  1400 HHFADCTVITIAHRISSVIDSDMVLLLDQGLIKEHDSPARLL-EDRSSLFSKLV 1452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 428/1313 (33%)
ABC_membrane 171..437 CDD:294371 58/271 (21%)
ABCC_MRP_domain1 499..699 CDD:213217 94/199 (47%)
ABC_membrane 799..1045 CDD:294371 76/256 (30%)
ABCC_MRP_domain2 1115..1336 CDD:213211 109/227 (48%)
ABCC6NP_187916.3 PLN03232 67..1452 CDD:215640 437/1352 (32%)
ABC_membrane 286..555 CDD:294371 58/276 (21%)
ABCC_MRP_domain1 601..801 CDD:213217 94/199 (47%)
ABC_membrane 902..1173 CDD:294371 88/298 (30%)
ABCC_MRP_domain2 1217..1437 CDD:213211 109/227 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3649
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74563
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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