DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and CG5789

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster


Alignment Length:1410 Identity:571/1410 - (40%)
Similarity:821/1410 - (58%) Gaps:164/1410 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ENPRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCASWERELKNDGR- 151
            :|||..:|.||.|.|.:.||:..:|.|:.|::.||.:.|:|.:|:.||:||...|.:||:...| 
  Fly    10 KNPRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLEDQWFKELERSHRK 74

  Fly   152 --SPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQPIFLVKLISYFSGEPDA------------ 202
              .|.|..||.|.|.......||..|:. :.::||.|..|.:|:..|...|.|            
  Fly    75 KQKPHLRNALFRCFLGPTIINGLICFIY-IVIKTLIPAVLAQLLIQFQKTPVAQLRNIDVNDISI 138

  Fly   203 -------ANAGFYYAVAQIV--------------------------------------------- 215
                   |.|...|.::|.|                                             
  Fly   139 SDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPIQPPVEEVDHNATAVRSILDQ 203

  Fly   216 --------ISALTVMILTPTTFG---IHHVCF-------KMRVAMGSMIFRKALRLTKGALGDTT 262
                    :::|..:::..|.|.   :|||..       :||:|..|:|:||.|||:....|.|.
  Fly   204 TVEHMWNDMNSLGAVLVLSTLFCCFLLHHVDLRQRLMGARMRIACCSLIYRKTLRLSMKTAGQTP 268

  Fly   263 SGHVVNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLL-FMPIQMYL 326
            :|:::||:|||:.|||.....:|::|:.|||.::..||::..|||.|:.||:.:|| .:|:|..|
  Fly   269 AGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAIVGVVGLLLKTVPVQTAL 333

  Fly   327 GTRTSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYIRGF 391
            ...||.::::.|||||.|:.::||::..|||:||||||:||:.:|..||..|:..||...|:|||
  Fly   334 SKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRSEIKQIRYASYLRGF 398

  Fly   392 DFARRIVLSRVAIFLSLVGYVILGKVFTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLTSIR 456
            ..:..:...|..::::|....::|:..|.:..|...:|||:|....:|:.|.|:...|:.|.|:|
  Fly   399 YLSTMVFTERSTLYITLAAAALMGQTITADFVFSAASYYNILQLVAAIWYPLAVSFGAEALVSLR 463

  Fly   457 RVEQFMQSEELGSSDKSEG--PSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWDPNSPDYTLSG 519
            |::.|:..|  |..::::|  ..:|...|:           ..|::|:|:.|.||...|..||..
  Fly   464 RIQDFLMLE--GREERTQGLTHKRDQEGGD-----------SRAVTIKDINASWDIEKPQKTLQS 515

  Fly   520 INLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLFSGTVRQNILF 584
            |||:|:.|.:.||||..|:||||::|.:||||....|.:.:.|.|||.:||.|||:|:||.||||
  Fly   516 INLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQGDLSYAAQEPWLFTGSVRNNILF 580

  Fly   585 GQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVYRKASIYLLDD 649
            |:..|.:||:||.:.|||..||..||..|.|:||||||:|||||:|||||||:||:.|.|||:||
  Fly   581 GEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSGGQRARISLARAVYKPAQIYLMDD 645

  Fly   650 PLSAVDASVARHLFDQCV--RGHLR--GSTVVLVTHQEQFLPHVDQIVILANGQIKALGDYESLL 710
            |||||||.|.|||||:.:  ||.|.  .:|.:|||||..||...|.|||:..|:|...|.|:.|:
  Fly   646 PLSAVDAHVGRHLFDEVIGPRGRLAQLKATRILVTHQVHFLSEADVIVIVDQGRILRQGTYQELI 710

  Fly   711 KTGLITGLGSLSKTDKAKTEEQE---------PLNLNSPDNKNEVTP----IKENSEQ------T 756
            .:.|     ..::..:...||:|         ||::||.::.:|..|    :|:..:|      :
  Fly   711 NSDL-----DFARLLERPKEEEEGENSRNQTSPLSVNSLESDDEDIPFIDGVKDGYQQLRKQSSS 770

  Fly   757 VGGSSS-----------GKEHVERQESGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGG 810
            |.||.|           ..:..|.|.|||||..::.:||.||..|::|..|:...|::||..:..
  Fly   771 VHGSKSLDSTQLDDNVDEDDLAEAQASGGISPRVWYEYFHAGSTLLSFSFMVFVMVMSQVVCSSS 835

  Fly   811 DYFLTYWVKKE-STAAGHGEMEDMESKSMDVYKYTLIIILSVIMNLSSSFLLFNIAKKASIRLHN 874
            |:|...|.::| ..:.|.......|.    :|.|..:||..|||.....||.|.|...||..||:
  Fly   836 DFFANIWTQQEHQRSQGEATFSTFEC----MYIYGALIIAVVIMTTFRGFLFFKICMHASKVLHD 896

  Fly   875 TIFNRVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVIANVNPLL 939
            .:|..:..|.|.||.....|.|||||:|||..:||:||..::|.:||||.:.||:|||..:||:|
  Fly   897 RMFACILHATMRFFDTTPSGRILNRFSKDMGAIDELLPRAMMDFIQIALVMFGILIVIGILNPVL 961

  Fly   940 LVPTLMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDAQRVLEKEFDS 1004
            :...|:::|:...:..|||:.|:||||:|.|.||||:|||:|||.||..||:...|.|:.||||.
  Fly   962 VAAMLVVAVVDVLILKLYLRPSQDLKRLEGICRSPVFSHLSASLTGLAIIRSRQLQDVVAKEFDL 1026

  Fly  1005 YQDAHSSAFFMYISTSQAFGYCMNCICVIYISIITLSFFAFP----PGNGADVGLVITQAMGLID 1065
            .||.|||.:.:.::.:...|..::|:..|:::.:|.||....    .||   |||.|.|||.|..
  Fly  1027 LQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSVTFSFIISSETTYSGN---VGLAIAQAMILTG 1088

  Fly  1066 MVQWGVRQTAELENTMTAVERVVEYESIEPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRYTPNA 1130
            |||:||||.||....||:||||::|..:|.|..|   .:|.||:.||.:|::.|:.::.||.||.
  Fly  1089 MVQYGVRQVAESLQQMTSVERVLQYTELEQEPAL---GEKTPPQQWPTRGQVEFRNMSCRYDPNG 1150

  Fly  1131 KAENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRLSYTDGSVLIDTRDTRQMGLHDLRRQI 1195
            ..  ||::|:..|:...||||||||||||||||.|||||::.:|.:.||..:|..:.|..||.:|
  Fly  1151 SP--VLRNLNLTIEAGWKVGIVGRTGAGKSSLIGALFRLAHIEGEIFIDGIETGTISLEILRTRI 1213

  Fly  1196 SIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQR 1260
            |||||:|||||.|:|||||||:.|:|.:||..||:|:|::.:    .||...::|.|.|||||||
  Fly  1214 SIIPQDPVLFSATIRYNLDPFERYTDAELWSALEDVELRKAI----PGLDYMVTERGGNFSVGQR 1274

  Fly  1261 QLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVM 1325
            ||:||||||||.|::||:||||||||||||.|||.|||.||:.|||||:||||||::|||:::||
  Fly  1275 QLLCLARAILRNNKVLVLDEATANVDPQTDALIQRTIRIKFKQCTVLTVAHRLHTVMDSDRIIVM 1339

  Fly  1326 DAGRVVEFGSPYELMTKSDSKVFHNLVNQSGRASYEGLLKIAQET 1370
            |||..|||..||.|:.||...: ..:|..:|..| |.|.|.|.::
  Fly  1340 DAGVAVEFDVPYLLLKKSQGHL-RQMVEATGGES-EALKKTASDS 1382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 562/1380 (41%)
ABC_membrane 171..437 CDD:294371 101/348 (29%)
ABCC_MRP_domain1 499..699 CDD:213217 113/203 (56%)
ABC_membrane 799..1045 CDD:294371 98/246 (40%)
ABCC_MRP_domain2 1115..1336 CDD:213211 131/220 (60%)
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 565/1392 (41%)
ABC_membrane 214..441 CDD:294371 84/226 (37%)
ABCC_MRP_domain1 495..699 CDD:213217 113/203 (56%)
ABC_membrane 863..1088 CDD:294371 99/227 (44%)
ABCC_MRP_domain2 1135..1350 CDD:213211 131/220 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I2776
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
109.870

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