DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and CG10226

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster


Alignment Length:1393 Identity:306/1393 - (21%)
Similarity:588/1393 - (42%) Gaps:280/1393 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 FISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDIL-------GNRLC--ASWE---RELKN 148
            |:.||.|...|.::.:     |.:..:.|.|.:..|.:.       |.::.  ||:|   :||:.
  Fly    61 FLQSLVFPIAIVVYSE-----LVAMFIERTLGQGTSSVTIGLSLFGGGKILTNASYEENMQELRK 120

  Fly   149 DGRSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQPIFLVKLISYFSGEPDAANAGFYYAVAQ 213
            |..|                      |.:.:.|.||..:|                :|.||..| 
  Fly   121 DSVS----------------------FGILMTLNTLLMLF----------------SGVYYVDA- 146

  Fly   214 IVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGALGDTTSGHVVNLISNDIPRLD 278
                             .:.:..|:.|.|....|:..||...|........:....|::::.::.
  Fly   147 -----------------FNRLALKLTVRMRREFFKATLRQEIGWHDMAKDQNFAVRITDNMEKIR 194

  Fly   279 S--APYTVHYLWV--GPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTRTSAIQLK-AA 338
            |  |....||:.:  ..:..:|::::...::.::.||       ::|:.:.:.:..:..|.| ..
  Fly   195 SGIAENLGHYVEIMCDVIISVVLSFIYGWKLALAIVF-------YIPLTLVVNSAVAHYQGKLTG 252

  Fly   339 ERTDNRIR---MVNEIISAIQVLKMYAWEQP----FEQMVTHAREKEMNTIRQGQYIRGFDFARR 396
            :...:.:|   :|.|:|.||:.:..:..|:.    ::.::..|       ::.|::...|.....
  Fly   253 QEQSSYVRASSVVEEVIGAIRTVVAFGGERSESLRYDSLLKPA-------LKAGKWKGAFSGLSD 310

  Fly   397 IVLSRVAIFLSLVGYVILG----------------KVFTPEIAFMITAYYNVLLAAMSIYVPSAI 445
            .|: :..:|::..|....|                :.:||.:..::.:  .::::|      :.|
  Fly   311 TVM-KAMLFITGAGSFWYGANLILYYRDPSIPIDEREYTPAVVMIVIS--GIIVSA------NQI 366

  Fly   446 IQTAQFLTSIRRVEQFMQSEELGSSDKSEGPSKDTVPGNPPSNNNEADL---LKSAISIRDLKAK 507
            .:|:.||      |.|..:.  ||:.........|...:|.|...:. |   ||.|:..||:..:
  Fly   367 SRTSPFL------ETFAMAR--GSASAILDVIDRTSLIDPLSKAGKI-LNYGLKGAVEFRDVFFR 422

  Fly   508 WDPNSPDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNG---------- 562
            :........|.|:|:.::.|..||::|.:|.|||:.||.:........||:.::|          
  Fly   423 YPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKSTCIQLLQRFYDPVFGQVLLDGEDVRKYNIKW 487

  Fly   563 ---SLSYTSQESWLFSGTVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRD--NTIVGERGA 622
               :::...||..||.|::.:||..|:|..:|:..|...|.|...|| ::.|..  :|.:.|:|.
  Fly   488 LRSNIAVVGQEPVLFQGSIGENIRHGKPEATQKEVEDAAKAANAHDF-IIALHKGYDTDISEKGV 551

  Fly   623 TLSGGQKARISLARSVYRKASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLP 687
            .|||||:.||::||::.::..|.|||:..||:|.. :..|....:....:|.|.::|:|:...:.
  Fly   552 QLSGGQRQRIAIARALIQQPKILLLDEATSALDYH-SEKLVQAALDKACKGRTTLVVSHRLSAIR 615

  Fly   688 HVDQIVILANGQIKALGDYESLLK------------------TGLITGLGSLSKTDKAK-TEEQE 733
            |..:||.:.||:....|.:|.|:|                  ..|:..|..:::..:.| :.|.|
  Fly   616 HAHRIVYIENGKAVEQGTHEELMKLEGFYHKMVTVHSYDDSAEELLNELEEVAEIKERKMSYEVE 680

  Fly   734 PLNLNSPDNKNEVTPIKENSE---QTVGGSSSGKEHVERQESGGISLALYRKYFQAGGGL---VA 792
            |..|.:   :|.:..:::|:|   :.:.|.::...:.|..:....|......:|:..|..   .:
  Fly   681 PYQLGT---RNSIVSLEKNAEFQMKNLNGLANITMNQEIDDPRVPSANFISTFFRILGWARPEWS 742

  Fly   793 FLVMLSSSVLAQVAVTGGDYFLTYWVKKESTAAGHGEM-----EDM--ESKSMDVYKYTLIIILS 850
            ||::        .|:..|.|.:|..|.....|..:|.:     |::  :|.||.:....:.|...
  Fly   743 FLII--------GAICAGLYGVTMPVFSVVLAELYGSLAKPTDEEVLEQSASMAIISLVIGIAAG 799

  Fly   851 VIMNLSSSFLLFNIAKK-ASIRLHNTIFNRVTRADMHFF--SINKHGSILNRFTKDMSQVDEVLP 912
            |:..:.:.|  ||:|.. .:.|:.:..|..:...:|.:|  ..|..|::..|.:.|.:.|...:.
  Fly   800 VVCYIQTFF--FNLAGVWLTTRMRSKTFRCIMNQEMGWFDRKENSIGALSARLSGDAASVQGAIG 862

  Fly   913 VVLVDVMQ-IALWLAGIIIVIANVNPLLLV-----PTLMLSVIFYHLRNLYLKTSRDLKRVEAIN 971
            ..|.:::| ...::..|.|.......|.|:     |.::.|::|    .........||..|.:.
  Fly   863 FPLSNIIQAFTNFICSIAIAFPYSWELALICLSTSPFMVASIVF----EARFGEKSALKEKEVLE 923

  Fly   972 RSPVYSHLAA-SLNGLTTIRALDAQ----RVLEKEFDSYQD---------------AHSSAFFMY 1016
            .:   |.:|. ::..:.|:..|..:    ::.:||.:.|:.               ..|..||.|
  Fly   924 ET---SRIATETITQIRTVAGLRREEELIKIYDKEVERYRHQILSRLKWRGLVNSLGKSLMFFGY 985

  Fly  1017 ISTSQAFGYCMNCIC----VIYISIITLSFFAFPPGNGADVGLVITQAMGLIDMVQWGVRQTAEL 1077
            ..|....|:    :|    :.:.:|:.:|               .|...||..:.| .:..|...
  Fly   986 AVTLTYGGH----MCADGKIKFETIMKIS---------------NTMLYGLFILAQ-SLAFTPAF 1030

  Fly  1078 ENTMTAVERVVEYESIEPEGMLEAPD--------DKKPPKTWPEQGEIIFKELNLRYTPNAKAEN 1134
            ...:.:..|:  ||.|:.:..:::|:        :....||...|..:.::.||..| |:.....
  Fly  1031 NAALLSANRM--YEIIDRKPQIQSPESFEIQQNGNGTAYKTNVVQQGVSYRGLNFSY-PSRPHIK 1092

  Fly  1135 VLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRLSYTD---GSVLIDTRDT-RQMGLHDLRRQI 1195
            ||::.:..|...:.|.:||.:|:|||:.:..|.|  |.|   |.:|||.... ..|.|..|||::
  Fly  1093 VLQNFNLDINQGQTVALVGASGSGKSTCVQLLMR--YYDPDEGKILIDQESIHHDMDLKTLRRRL 1155

  Fly  1196 SIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCLEEVKL---KEVVSDLPDGLASKISEGGTNFSV 1257
            .|:.|||.||..::..|:...|......:...:|..|:   .|.:..||....:.:...||..|.
  Fly  1156 GIVSQEPSLFEKSIADNIGYGDTSRQVPMQQIIEAAKMANAHEFIMSLPAQYDTVLGSKGTQLSG 1220

  Fly  1258 GQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKV 1322
            ||:|.:.:|||::|..:||::||||:.:|.|::.::|..:.|.....|.:.|||||.||.:::.:
  Fly  1221 GQKQRIAIARAMVRNPKILLLDEATSALDFQSERVVQQALDSACSGRTCIVIAHRLSTIQNANVI 1285

  Fly  1323 MVMDAGRVVEFGSPYELMTKSD--SKVF 1348
            .|:.||::||.||..:|:.|:.  ||::
  Fly  1286 CVIQAGKIVEQGSHSQLLAKNGIYSKLY 1313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 303/1384 (22%)
ABC_membrane 171..437 CDD:294371 43/293 (15%)
ABCC_MRP_domain1 499..699 CDD:213217 62/214 (29%)
ABC_membrane 799..1045 CDD:294371 54/285 (19%)
ABCC_MRP_domain2 1115..1336 CDD:213211 74/227 (33%)
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 298/1364 (22%)
ABC_membrane <147..333 CDD:279056 32/200 (16%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 67/236 (28%)
ABC_membrane 749..1019 CDD:279056 56/297 (19%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 79/241 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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