Sequence 1: | NP_001260823.1 | Gene: | l(2)03659 / 47905 | FlyBaseID: | FBgn0010549 | Length: | 1374 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036822.1 | Gene: | Abcb4 / 24891 | RGDID: | 620248 | Length: | 1278 | Species: | Rattus norvegicus |
Alignment Length: | 1463 | Identity: | 325/1463 - (22%) |
---|---|---|---|
Similarity: | 581/1463 - (39%) | Gaps: | 368/1463 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 FELGHQTENCKQKLTVNSENNSAQNEKEKVLPENPRARSNFISSLCFWYTIPIFRKGYRKTLDST 120
Fly 121 DLYRPLEEQKSDILGNRLCASWERELKNDGRSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQ 185
Fly 186 PIFLVKLISYFSG---EPDAANAGFYYA--------VAQIVISALTVMILTPTTFGIHHVCFKMR 239
Fly 240 VAMGSMI-------FRKALRLTKGALGDTTSGHVVNLISNDIPRLDS-----------------A 280
Fly 281 PYTVHYL--WVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTRTSAIQLKAAERTDN 343
Fly 344 RIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYIRGFDFARRIVLSR------- 401
Fly 402 --VAIFLSLVGY---------VILGKVFTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLTSI 455
Fly 456 RRVEQFMQSEELGSSDKSEGPSK---DTVPGNP-----PSNNNEADLLKSAISIRDLKAKWDPNS 512
Fly 513 PDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGS-------------L 564
Fly 565 SYTSQESWLFSGTVRQNILFGQ---PMDSQRYEEVVKKCALER---DFDL-LPLRDNTIVGERGA 622
Fly 623 TLSGGQKARISLARSVYRKASIYLLDDPLSAVDASVARHLFDQCVRGHLR-GSTVVLVTHQEQFL 686
Fly 687 PHVDQIVILANGQIKALGDYESLL-KTGLITGLGSLSKTDKAKTEEQEPLNLNSPDNKNEVTP-- 748
Fly 749 ----IKENSEQTVGGSSSGKEH-----VERQE-SGGISLALYRK----------YFQAG------ 787
Fly 788 -GGL-VAFLVMLSSSVLAQVAVTG-GDYFLTYWVKKESTAAGHGEMEDMESKSMDVYKYTLIIIL 849
Fly 850 SVIMNLSSSFLL--FNIAKKASI---RLHNTIFNRVTRADMHFFSINKH--GSILNRFTKDMSQV 907
Fly 908 DEVLPVVLVDVMQIALWL-AGIIIVIANVNPLLLVPTLMLSVI-------FYHLRNLYLKTSRDL 964
Fly 965 KRVEAINRSPVYSHLAASLNGLTTIRALDAQRVLEKEF---------DSYQDAHSSAFFMYISTS 1020
Fly 1021 QAFGYCMNCICVIYISIITLSFFAFPPGNG----ADVGLVITQAMGLIDMVQWGVRQT------- 1074
Fly 1075 AELENT--MTAVERVVEYESIEPEGMLEAPDDKKPPKTWPE--QGEIIFKELNLRYTPNAKAENV 1135
Fly 1136 LKSLSFVIQPREKVGIVGRTGAGKSSLINALFRLSYTD---GSVLIDTRDTRQMGLHDLRRQISI 1197
Fly 1198 IPQEPVLFSGTMRYNL---DPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQ 1259
Fly 1260 RQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMV 1324
Fly 1325 MDAGRVVEFGSPYELMTKSDSKVFHNLVN-QSG 1356 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l(2)03659 | NP_001260823.1 | CFTR_protein | 89..1343 | CDD:273530 | 312/1414 (22%) |
ABC_membrane | 171..437 | CDD:294371 | 48/320 (15%) | ||
ABCC_MRP_domain1 | 499..699 | CDD:213217 | 67/220 (30%) | ||
ABC_membrane | 799..1045 | CDD:294371 | 57/270 (21%) | ||
ABCC_MRP_domain2 | 1115..1336 | CDD:213211 | 70/226 (31%) | ||
Abcb4 | NP_036822.1 | PTZ00265 | 29..1271 | CDD:240339 | 316/1434 (22%) |
ABC_membrane | 58..342 | CDD:279056 | 52/355 (15%) | ||
ABC_MTABC3_MDL1_MDL2 | 392..628 | CDD:213216 | 74/243 (30%) | ||
Interaction with HAX1. /evidence=ECO:0000269|PubMed:15159385 | 622..646 | 3/23 (13%) | |||
ABC_membrane | 714..984 | CDD:279056 | 69/315 (22%) | ||
ABC_MTABC3_MDL1_MDL2 | 1033..1272 | CDD:213216 | 72/243 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |