DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)03659 and Abcc4

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001028508.2 Gene:Abcc4 / 239273 MGIID:2443111 Length:1325 Species:Mus musculus


Alignment Length:1323 Identity:553/1323 - (41%)
Similarity:833/1323 - (62%) Gaps:81/1323 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 NPRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCASWEREL---KNDG 150
            ||...:|..|.:.||:..|:|:.|:::.|:..|::..|.|.:|..||..|...|::||   |.|.
Mouse    11 NPLQDANLCSRVFFWWLNPLFKTGHKRRLEEDDMFSVLPEDRSKHLGEELQRYWDKELLRAKKDS 75

  Fly   151 RSPSLVRALLRVFGWQLGFPGLAIF-VVELGLRTLQPIFLVKLISYFSG-EPD---AANAGFYYA 210
            |.|||.:|:::.: |: .:..|.|| ::|.|.|.:||:||.|:|.||.. :||   |.:..:.||
Mouse    76 RKPSLTKAIIKCY-WK-SYLILGIFTLIEEGTRVVQPLFLGKIIEYFEKYDPDDSVALHTAYGYA 138

  Fly   211 VAQIVISALTVMILTPTTFGIHHVCF--------KMRVAMGSMIFRKALRLTKGALGDTTSGHVV 267
            .   |:|..|:::..     :||:.|        ::||||..||:||||||:..|:|.||:|.:|
Mouse   139 A---VLSMCTLILAI-----LHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNSAMGKTTTGQIV 195

  Fly   268 NLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTRTSA 332
            ||:|||:.:.|.....:|:||.||||.:.:|.|::.|||||.:.|:..:::.:|:|..:|...|:
Mouse   196 NLLSNDVNKFDQVTIFLHFLWAGPLQAIAVTVLLWVEIGISCLAGLAVLVILLPLQSCIGKLFSS 260

  Fly   333 IQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYIRGFDFARRI 397
            ::.|.|..||.|||.:||:|:.::::||||||:.|..::.:.|:||::.|....|:||.:.|...
Mouse   261 LRSKTAAFTDARIRTMNEVITGMRIIKMYAWEKSFADLIANLRKKEISKILGSSYLRGMNMASFF 325

  Fly   398 VLSRVAIFLSLVGYVILGKVFTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLTSIRRVEQFM 462
            :.::|.:|::...||:||...|....|:....|..:...::::.||||.:.::.:.||||::.|:
Mouse   326 IANKVILFVTFTSYVLLGNEITASHVFVAMTLYGAVRLTVTLFFPSAIERGSEAIVSIRRIKNFL 390

  Fly   463 QSEELGSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWDPNSPDYTLSGINLEIKPG 527
            ..:||        |.:   ..:.||:.      |:.:.::|..|.||......||.|::...:||
Mouse   391 LLDEL--------PQR---KAHVPSDG------KAIVHVQDFTAFWDKALDSPTLQGLSFIARPG 438

  Fly   528 SVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLFSGTVRQNILFGQPMDSQR 592
            .::||:|..|:|||||:.|:||||...||.:.|:|.::|.||:.|:||||||.|||||:..:.:|
Mouse   439 ELLAVVGPVGAGKSSLLSAVLGELPPASGLVSVHGRIAYVSQQPWVFSGTVRSNILFGKKYEKER 503

  Fly   593 YEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVYRKASIYLLDDPLSAVDAS 657
            ||:|:|.|||::|..||...|.|::|:||||||||||||::|||:||:.|.|||||||||||||.
Mouse   504 YEKVIKACALKKDLQLLEDGDLTVIGDRGATLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAE 568

  Fly   658 VARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALGDYESLLKTGLITGLGSLS 722
            |.:|||..|:...|.....:|||||.|:|.....|:||.:|::...|.|...||:|:  ..|||.
Mouse   569 VGKHLFQLCICQALHEKITILVTHQLQYLKAASHILILKDGEMVQKGTYTEFLKSGV--DFGSLL 631

  Fly   723 KTDKAKTEEQEPLNLNSPDNKNEVT--------------PIKENSEQTVGGSSSGKEHVERQES- 772
            |.:   .||.||..........:.|              .:|:.:.:  |..:...:.|:.:|| 
Mouse   632 KKE---NEEAEPSTAPGTPTLRKRTFSEASIWSQQSSRPSLKDGAPE--GQDAENTQAVQPEESR 691

  Fly   773 --GGISLALYRKYFQAGGG--LVAFLVMLSSSVLAQVAVTGGDYFLTYWVKKE----STAAGHGE 829
              |.|....|:.||.||..  .:.|||:|  :::.||.....|::|::|..|:    :|...:|.
Mouse   692 SEGRIGFKAYKNYFSAGASWFFIIFLVLL--NMVGQVFYVLQDWWLSHWANKQGALNNTRNANGN 754

  Fly   830 MEDMESKSMDVYKYTLIIILSVIMNLSSSFLLFNIAKKASIRLHNTIFNRVTRADMHFFSINKHG 894
            :.:....|..:..|..:..::|:..::.|.|:|.|...||..|||.:|..:.:|.:.||..|..|
Mouse   755 ITETLDLSWYLGIYAGLTAVTVLFGIARSLLVFYILVNASQTLHNRMFESILKAPVLFFDRNPIG 819

  Fly   895 SILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVIANVNPLLLVPTLMLSVIFYHLRNLYLK 959
            .|||||:||:..:|::||:..:|.:|..|.:..:|.|.|.|.|.:|:|.:.|||:|..||..:|:
Mouse   820 RILNRFSKDIGHMDDLLPLTFLDFIQTLLLVVSVIAVAAAVIPWILIPLVPLSVVFLVLRRYFLE 884

  Fly   960 TSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDAQRVLEKEFDSYQDAHSSAFFMYISTSQAFG 1024
            ||||:||:|:..||||:|||::||.||.||||..|:...::.||::||.||.|:|::::||:.|.
Mouse   885 TSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAYKAEERCQELFDAHQDLHSEAWFLFLTTSRWFA 949

  Fly  1025 YCMNCICVIYISIITL-SFFAFPPGNGADVGLVITQAMGLIDMVQWGVRQTAELENTMTAVERVV 1088
            ..::.||.|::.::.. |.......|...|||.::.|:.|:.|.||.|||:||:||.|.:||||:
Mouse   950 VRLDAICAIFVIVVAFGSLVLAKTLNAGQVGLALSYALTLMGMFQWSVRQSAEVENMMISVERVI 1014

  Fly  1089 EYESIEPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVGIVG 1153
            ||..:|.|...|.  .|:||..||.:|.|:|..:|..|:.:...  |||.|:.:|:.||||||||
Mouse  1015 EYTDLEKEAPWEC--KKRPPPGWPHEGVIVFDNVNFTYSLDGPL--VLKHLTALIKSREKVGIVG 1075

  Fly  1154 RTGAGKSSLINALFRLSYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDE 1218
            ||||||||||:||||||..:|.:.||...|.::||||||:::||||||||||:||||.|||||:|
Mouse  1076 RTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNE 1140

  Fly  1219 YSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATA 1283
            ::||:||..||||:|||.:.|||..:.::::|.|:|||||||||||||||||:.||||::|||||
Mouse  1141 HTDEELWRALEEVQLKEAIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILKNNRILIIDEATA 1205

  Fly  1284 NVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVF 1348
            ||||:||.|||..||.||..||||||||||:|||||||:||:|:||:.|:..||.|:...:| :|
Mouse  1206 NVDPRTDELIQQKIREKFAQCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNPES-LF 1269

  Fly  1349 HNLVNQSGRASYEGLLKIAQETF 1371
            :.:|.|.|:.....|.:.|::.:
Mouse  1270 YKMVQQLGKGEAAALTETAKQVY 1292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 546/1293 (42%)
ABC_membrane 171..437 CDD:294371 102/278 (37%)
ABCC_MRP_domain1 499..699 CDD:213217 103/199 (52%)
ABC_membrane 799..1045 CDD:294371 91/250 (36%)
ABCC_MRP_domain2 1115..1336 CDD:213211 142/220 (65%)
Abcc4NP_001028508.2 PLN03130 12..1284 CDD:215595 550/1312 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 657..690 3/34 (9%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:O15439 1322..1325
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841683
Domainoid 1 1.000 232 1.000 Domainoid score I2403
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74563
Inparanoid 1 1.050 1109 1.000 Inparanoid score I229
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm42331
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - O PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.810

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