DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)03659 and pgp-11

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001364583.1 Gene:pgp-11 / 183971 WormBaseID:WBGene00004005 Length:1241 Species:Caenorhabditis elegans


Alignment Length:1401 Identity:304/1401 - (21%)
Similarity:549/1401 - (39%) Gaps:349/1401 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 RLC---ASWERELKNDGRSPSLVRALLRVFGW----QLGFPGLAIFVVELGLRTLQPIFLVKLIS 194
            :||   :::..|.|....:||:.::|..:..:    .|.|...|:....|| .|:||:.|  ||.
 Worm     6 KLCRPVSAFGDESKVSDVTPSIRQSLNLMINFAKKSDLIFIITALICALLG-GTIQPVVL--LIG 67

  Fly   195 ------YFSGEPDAANAGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVA----------MG 243
                  |.:....|.|..|.|:|..::.:.|...::......|..||.:...:          :|
 Worm    68 GWITDLYLTNGNTAGNDEFLYSVLTLIYAGLGFGVIILVLALIQGVCIQRGTSRILDSIRKEFLG 132

  Fly   244 SMIFRKALRLTKGALGDTTS--GHVVNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIG 306
            :::.:.|..|.|.:.|..|.  ...:.:||:.:.              ....:||..:.|:....
 Worm   133 AVLRQDANWLDKHSSGSITCQLNENIEVISDGLG--------------NKCCMLVRGFAMFTSSI 183

  Fly   307 ISAVFGVLFMLLFMPIQM--------YLGTRTSAI---QLKAAERTDNRIRMVNEIISAIQVLKM 360
            |:..| :.:.|.|:...|        :|.|:.:.:   :|.:.....:.|  :.|.|..::.::.
 Worm   184 IACAF-INWQLTFITFTMGPVSAFVLHLLTKVNEVSNEELMSLSAQSHAI--IEESILNVRTVQS 245

  Fly   361 YAWEQPFEQMVTHAREKEMNTIRQGQYIRGFDFARRIVLSRVAIFLSLVGYVILGKVFTPEIAFM 425
            ...:......:....||......:..:..||       ...:|:|   |.|.|.|    ..:.|.
 Worm   246 CNGQNFMITKLNQVNEKIKKFYNKSTFWAGF-------FDGLALF---VIYFITG----ISLFFG 296

  Fly   426 ITAYYN--------VLLAAMSIYVP-----------SAIIQTA-QFLTSIRRVEQFMQSEELGSS 470
            ...|:|        |:|...:|.|.           |::.|.| .||...:.:|         |:
 Worm   297 CRLYFNQEIGKAGDVILIVNTICVTGYFLGLLGPHMSSLQQAATSFLLLYKTIE---------SA 352

  Fly   471 DKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWDPNSPDYTLSGINLEIKPGSVVAVIGL 535
            .||||...:....:...|          |..||::.|:.....: .|.|::|::.||..||::|.
 Worm   353 PKSEGKEGEIKISSTRGN----------IEFRDVRFKYFTRDNE-VLQGLSLQVLPGQTVALVGT 406

  Fly   536 TGSGKSSLIQAILGELKANSGQLQVNG-------------SLSYTSQESWLFSGTVRQNILFGQP 587
            :|.|||:.|..:....:|:.|::.::|             .:....||..||.||:.:||..|:.
 Worm   407 SGCGKSTSIGLLTKLYRASEGEILIDGKNIDMLDAKSLRQQIGIVQQEPKLFDGTIMENIKLGRN 471

  Fly   588 MDSQRYEEVVKKCA-----------LERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVYRK 641
            :|    ||.:|..|           ||..::       |.:|..|..||||||.||.:||::...
 Worm   472 VD----EETIKTAADIANASSFIEKLENGYE-------TRLGPGGVQLSGGQKQRICIARALVTS 525

  Fly   642 ASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALGDY 706
            .||.|||:..||:| |...|:.::.:.....|.|.:::.|:...|..||:|.:|..|:.|.:|.:
 Worm   526 PSILLLDEATSALD-SHNEHIVNKALTKASEGRTTIIIAHRLSSLKSVDRIYVLDQGKTKEIGTH 589

  Fly   707 ESLLKTGLITGLGSLSKTDKAKTEEQEPLNLNSPDNKNEVTPIKENSEQTVGGSSSGKEHVERQE 771
            :.|:..|     |..::..|::..||                             |.|:..||:|
 Worm   590 DELILLG-----GIYARLAKSQEVEQ-----------------------------SSKKDWEREE 620

  Fly   772 SGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFLTYWVKKESTAAGHGEMEDMESK 836
                   |.|.......|....::..:|::|.:               .|....|....|:.|.|
 Worm   621 -------LRRAEKMKKKGRTVEIIEPNSTILQE---------------HEHNFVGSVITENEEQK 663

  Fly   837 -----------SMDVYKYTLIIILSVI-----------MNLSSSFLLFNIAKKASIRLHNTIFNR 879
                       .:..::.|||:|::::           :.:|.:|.....:|...:..:.....:
 Worm   664 ISFSGISKLFNYLPKHRKTLILIIALLIPRAIELCSYGIGMSFAFKTLQRSKDDYMTWNYITLAQ 728

  Fly   880 VTRADMHFFSINKH-----GSILNRFTKDMSQ--VDEVL--PVVLVD------------------ 917
            .|.|.:.|:.::..     |.:.|....::.|  :.|||  |:...|                  
 Worm   729 QTLAGITFWILHTSLMYLCGWLANEVMNEVKQEMLSEVLNKPIPYFDNPETSPSACVSRIISHAH 793

  Fly   918 ---------VMQIALWLAGIIIVIANVNPLL-------LVPTLMLSVIFYHLRNLYLKTSRDLKR 966
                     .::...::||.|..:....|.:       |..|::|::...|..::   ..|....
 Worm   794 NCYACLDHRAIRFVWFIAGTIFSLLLAFPFVWELGVLGLGITILLTIFSLHFVSV---AHRAHSE 855

  Fly   967 VEAINRS-----PVYSHLAASLNGLTTIRALDAQRVLEKEFDSYQDAHSSAFFMYISTSQAF--- 1023
            ...:::|     .:..|:.|       |:.|..:...|.:|..           |:.||:.:   
 Worm   856 KSVMDKSGEFAVEIVEHIRA-------IKLLAVEGYFENKFSE-----------YLKTSEIYENK 902

  Fly  1024 -------------GYCMNC-ICVIYISIITL---------SFFAFPPGNGADVGLVITQAMGLID 1065
                         .|...| :.:.::..:.:         .|.||   |||.:     .|.|::.
 Worm   903 IGFVSSLNFAITQSYVFACDMLLFFVGTLLIYHGRYSPDKVFLAF---NGAQM-----SAWGVMY 959

  Fly  1066 MVQWG---VRQTAELENTMTAVERVVEYESIEPEGMLEAPDDKKPPKTWPE-QGEIIFKELNLRY 1126
            ...|.   ||.:|......:..::   ..:....|:.:           || .|::...::...|
 Worm   960 FSPWFPEIVRGSASANQIFSFFDK---NRTNSTSGLSK-----------PEINGKVEVSDVTFAY 1010

  Fly  1127 TPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRL-SYTDGSVLIDTRDTRQMGLHD 1190
             |:....||.:..|..|.....:.:||.:|.|||::|:.|.|. |...|.:.:|..|...:.::.
 Worm  1011 -PSTPHRNVCEGFSLNIPKGHSIALVGASGCGKSTIISMLERFYSAKAGRISVDDNDIDGIDVNH 1074

  Fly  1191 LRRQISIIPQEPVLFSGTMRYNLD-PFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTN 1254
            ||..||::.||||||:.|:|.|:. ..||.|.|::....:.......:...|.|..:.:.|||.:
 Worm  1075 LRNNISVVGQEPVLFNATIRENITIGIDEVSVEEVQKACKAANAAGFIESFPLGYDTIVGEGGAS 1139

  Fly  1255 FSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDS 1319
            .|.||:|.:.:||||:|:.:||::||||:.:|.|::.::|..:||.....|.:.:||||.|:...
 Worm  1140 LSGGQKQRIAIARAIIRKPKILLLDEATSALDTQSEEIVQKALRSATTGRTSIIVAHRLSTVQHC 1204

  Fly  1320 DKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLVNQS 1355
            |.:..:..|.|.|:|:..||:. .|||....:..||
 Worm  1205 DTIYYISRGAVAEYGTHAELVA-MDSKYARLVAAQS 1239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 299/1387 (22%)
ABC_membrane 171..437 CDD:294371 56/302 (19%)
ABCC_MRP_domain1 499..699 CDD:213217 67/223 (30%)
ABC_membrane 799..1045 CDD:294371 47/341 (14%)
ABCC_MRP_domain2 1115..1336 CDD:213211 73/222 (33%)
pgp-11NP_001364583.1 PTZ00265 38..1235 CDD:240339 295/1363 (22%)
MdlB 46..607 CDD:224055 144/631 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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