DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)03659 and haf-1

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_503098.2 Gene:haf-1 / 178522 WormBaseID:WBGene00001811 Length:677 Species:Caenorhabditis elegans


Alignment Length:718 Identity:171/718 - (23%)
Similarity:298/718 - (41%) Gaps:151/718 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   706 YESLLKTGLITGLGSLSKTDKAKTEEQEPLNLN--SPDNKNEVTPIKENSEQTVGGSSSGKEHVE 768
            |..||:|..:.  ..:.|.|.....:.:.||.|  ..|.:|....::.         ::.|:.||
 Worm    20 YRMLLQTKAVP--VQIIKRDLTAKVKNQKLNQNIRRVDRRNAAYLLRH---------TTWKDLVE 73

  Fly   769 RQESGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGG--DYFLTYWVKKESTAAGHGEME 831
            ..|..    ..:||:...|   .:|:|:.|...|....:.|.  |.|          .:..|..:
 Worm    74 LYEIA----KPFRKWIFLG---TSFMVVSSGIFLIIPRILGKLIDQF----------DSNTGVQK 121

  Fly   832 DMESKSMDVYKY------TLIIILSV-IMNLSSSFLLFNIAKKASI-RLHNTIFNRVTRADMHFF 888
            ..|..:|.:.||      :|:.:|:: .:..::......||....: .|...:::.:.|.||.||
 Worm   122 AEEVFTMKIAKYFKEQPMSLVGLLAIGALATAAKVYCLQIAGVNIVGSLRKMVYSSIIRQDMTFF 186

  Fly   889 SINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVIANVNP--LLLVPTLMLSV--- 948
            ..|..|.|.:|...|         .|:|.....:...||:..|:..|..  ::|:.:|.||.   
 Worm   187 DKNMVGEIGSRHAAD---------TVIVGYSVSSSLRAGVRAVLVGVGSIGMMLMTSLELSTVSF 242

  Fly   949 --------IFYHLRNLYLKTSRDLKRVEA-INRSPVYSHLAASLNGLTTIRALDAQRVLEKEF-- 1002
                    ||.....:..:.:..|:.|.| :|::.:     ..:..:.|||.|.|::....|:  
 Worm   243 LTAPIVMGIFKMFGRVQQQCTWQLQEVAADVNQTAI-----ERMANMKTIRMLSAEQQSIDEYCK 302

  Fly  1003 --------------------DSYQDAHSSAFFMYISTSQAFGYCMNCICVIYISIITLSFFAFPP 1047
                                .|:|....|||      |....|..:.|...:|:...||.|..  
 Worm   303 KGELVLDISKTEALAKGSLIGSFQFTGYSAF------SSILFYGSHLINTGHITYGELSSFCL-- 359

  Fly  1048 GNGADVGLVITQAMGLIDMVQWGVRQTAELENT----------MTAVERVVEYESIEPEGMLEAP 1102
                                 :.|...|.|.|.          :.|..|::|.::.:|...|.:.
 Worm   360 ---------------------YAVLAAASLSNISGFYNEVMKGLGASSRLLELKNAQPIMNLNSG 403

  Fly  1103 DDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKV-GIVGRTGAGKSSLINAL 1166
            ..|....|     .|.|:.::..|   |..:..|:::||.| ||.|: .::|.:|:||||:.|.:
 Worm   404 IKKTDITT-----SIQFENVSFAY---AGRKKTLENISFDI-PRGKITAVIGPSGSGKSSIANLM 459

  Fly  1167 FRL-SYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCLEE 1230
            .|| ...||.|.:|..|.|.:.....|..|..:.||||||:.::|.|:....|:.::.....|||
 Worm   460 LRLYDPADGRVTVDGVDLRDLNATTWRHAIGTVGQEPVLFTCSIRENILMGTEHPEKVSQYELEE 524

  Fly  1231 ----VKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDG 1291
                ....:.:....:|..:.:.|.|...|.||:|.:.:|||::.:.:|:::||||:.:|..:|.
 Worm   525 AAQLANALDFIQGFENGFETMVGEHGCKLSGGQKQRIAIARALISKPKIMILDEATSALDATSDY 589

  Fly  1292 LIQATIRS--KFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLVNQ 1354
            ||:.|:.:  |..:.|||.|||||.|:..:|:|:.::.||:...|:..|:|     |:.:::|.|
 Worm   590 LIRMTLDNLLKNHNLTVLVIAHRLATMQQADQVVYVNRGRIEGQGTFDEMM-----KIQNSIVEQ 649

  Fly  1355 SGR 1357
            ..|
 Worm   650 EAR 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 167/702 (24%)
ABC_membrane 171..437 CDD:294371
ABCC_MRP_domain1 499..699 CDD:213217
ABC_membrane 799..1045 CDD:294371 58/291 (20%)
ABCC_MRP_domain2 1115..1336 CDD:213211 75/228 (33%)
haf-1NP_503098.2 MdlB 82..641 CDD:224055 152/628 (24%)
ABC_membrane 93..363 CDD:294371 60/322 (19%)
P-loop_NTPase 413..641 CDD:304359 77/236 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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