DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and Abcc3

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_542148.2 Gene:Abcc3 / 140668 RGDID:71101 Length:1523 Species:Rattus norvegicus


Alignment Length:1372 Identity:478/1372 - (34%)
Similarity:741/1372 - (54%) Gaps:147/1372 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PEN------PRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCASWER- 144
            |||      |.|.:.|.|.|.||:...:...|||:.|:.:||:...||..|..:..||..:|:: 
  Rat   199 PENLDTNPCPEASAGFFSRLSFWWFTKLAILGYRRPLEDSDLWSLSEEDCSHKVVQRLLEAWQKQ 263

  Fly   145 ------------ELKNDG------------RSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQ 185
                        |.|..|            :.||.:|||:|.|...| ..|....:::..|..:.
  Rat   264 QTQASGPQTAALEPKIAGEDEVLLKARPKTKKPSFLRALVRTFTSSL-LMGACFKLIQDLLSFIN 327

  Fly   186 PIFLVKLISYFSGEPDAAN-AGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRK 249
            |..|..||.:.| :|.|.. .||..|....|.|.:..:||......|..:..::|.|:..:|:||
  Rat   328 PQLLSILIRFIS-DPTAPTWWGFLLAGLMFVSSTMQTLILHQHYHCIFVMALRIRTAIIGVIYRK 391

  Fly   250 ALRLTKGALGDTTSGHVVNLISNDIPR-LDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGV 313
            ||.:|.....:.|.|.:|||:|.|..| :|.:|: ::.||..||||::..|.::|.:|.||:.||
  Rat   392 ALTITNSVKREYTVGEMVNLMSVDAQRFMDVSPF-INLLWSAPLQVILAIYFLWQILGPSALAGV 455

  Fly   314 LFMLLFMPIQMYLGTRTSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKE 378
            ..::|.:|:...:..:....|::..:..|:||::::||::.|:|||:||||..|.:.|...|:.|
  Rat   456 AVIVLLIPLNGAVSMKMKTYQVQQMKFKDSRIKLMSEILNGIKVLKLYAWEPTFLEQVEGIRQSE 520

  Fly   379 MNTIRQGQYIRGFDFARRIVLSRVAIFLSLVGYVILGK--VFTPEIAFMITAYYNVLLAAMSIYV 441
            :..:|:|.|::.......:....:...::|..||.:.|  |...|.||:..:.:|:|...::: :
  Rat   521 LQLLRKGAYLQAISTFIWVCTPFMVTLITLGVYVCVDKNNVLDAEKAFVSLSLFNILKIPLNL-L 584

  Fly   442 PSAIIQTAQFLTSIRRVEQFMQSEELGSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKA 506
            |..|....|...|::|::.|:..:||   |......|...||.             ||:|.:...
  Rat   585 PQLISGMTQTSVSLKRIQDFLNQDEL---DPQCVERKTISPGR-------------AITIHNGTF 633

  Fly   507 KWDPNSPDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQES 571
            .|..:.|. ||..:|::|..|::|||:|..|.|||||:.|:|||::...|.:.|.||::|..|::
  Rat   634 SWSKDLPP-TLHSLNIQIPKGALVAVVGPVGCGKSSLVSALLGEMEKLEGAVSVKGSVAYVPQQA 697

  Fly   572 WLFSGTVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLAR 636
            |:.:.|:::|:||||||:.:||::.::.|||..|.|:||..|.|.:||:|..|||||:.|:||||
  Rat   698 WIQNCTLQENVLFGQPMNPKRYQQALETCALLADLDVLPGGDQTEIGEKGINLSGGQRQRVSLAR 762

  Fly   637 SVYRKASIYLLDDPLSAVDASVARHLFDQCV--RGHLRGSTVVLVTHQEQFLPHVDQIVILANGQ 699
            :||..|:|:||||||||||:.||:|:|||.:  .|.|.|.|.|||||...|||..|.|::||:||
  Rat   763 AVYSDANIFLLDDPLSAVDSHVAKHIFDQVIGPEGVLAGKTRVLVTHGISFLPQTDFIIVLADGQ 827

  Fly   700 IKALGDYESLLKTGLITGLGSLSK-----------------------------------TDKAKT 729
            |..:|.|..||:..     ||.:.                                   ||...|
  Rat   828 ITEMGHYSELLQHD-----GSFANFLRNYAPDENQEANEGVLQHANEEVLLLEDTLSTHTDLTDT 887

  Fly   730 E-----------------EQEPLNLNSPDNKNEVTPIKEN--SEQTVGGSSSGKEHVERQESGGI 775
            |                 ..|....|.|..|...:.:::.  :.||....:..||.:  .|:|.:
  Rat   888 EPAIYEVRKQFMREMSSLSSEGEGQNRPVLKRYTSSLEKEVPATQTKETGALIKEEI--AETGNV 950

  Fly   776 SLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFLTYWVKKESTAAGHGEMEDMESKSMDV 840
            .|::|..|.::.|......:.|..:....||: |.:.:|:.|.   :....||:   ..:.|:.:
  Rat   951 KLSVYWDYAKSVGLCTTLFICLLYAGQNAVAI-GANVWLSAWT---NDVEEHGQ---QNNTSVRL 1008

  Fly   841 YKYTLIIILSVIMNLSSSFLLFNIAKKASIRLHNTIFNRVTRADMHFFSINKHGSILNRFTKDMS 905
            ..|..:.||..::.:.|:|.:...|.:|:..||..:.:...||...||.....|.|||||:||:.
  Rat  1009 GVYATLGILQGLLVMLSAFTMVVGAIQAARLLHTALLHNQIRAPQSFFDTTPSGRILNRFSKDIY 1073

  Fly   906 QVDEVL-PVVLVDVMQIALWLAGIIIVIANVNPLLLVPTLMLSVIFYHLRNLYLKTSRDLKRVEA 969
            .:|||| |.:|:........::.|::::|: .||..|..|.|:|.:..::..|:.|||.|||:|:
  Rat  1074 VIDEVLAPTILMLFNSFYTSISTIVVIVAS-TPLFCVVVLPLAVFYGFVQRFYVATSRQLKRLES 1137

  Fly   970 INRSPVYSHLAASLNGLTTIRALDAQRVLEKEFDSYQDAHSSAFFMYISTSQAFG----YCMNCI 1030
            ::|||::||.:.::.|.:.|||....:..:...|:..|::....:.||::::..|    :..||:
  Rat  1138 VSRSPIFSHFSETVTGTSVIRAYGRVQDFKVLSDAKVDSNQKTTYPYIASNRWLGVHVEFVGNCV 1202

  Fly  1031 CVIYISIITLSFFAFPPGNGADVGLVITQAMGLIDMVQWGVRQTAELENTMTAVERVVEYESIEP 1095
            .:.......:...:..||.   |||.::.|:.:...:.|.:|..::||:.:.|||||.||...| 
  Rat  1203 VLFSALFAVIGRNSLNPGL---VGLSVSYALQVTLSLNWMIRTLSDLESNIIAVERVKEYSKTE- 1263

  Fly  1096 EGMLEAP---DDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVGIVGRTGA 1157
               .|||   :..:.|:.||..|.:.|:..::||.|.  .|.|||:|:..:|..|||||||||||
  Rat  1264 ---TEAPWVLESNRAPEGWPRSGVVEFRNYSVRYRPG--LELVLKNLTLHVQGGEKVGIVGRTGA 1323

  Fly  1158 GKSSLINALFR-LSYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYSD 1221
            ||||:...||| |...:|.:.||..:...:||||||.|::||||:|:|||||:|.|||||..|||
  Rat  1324 GKSSMTLCLFRILEAAEGEIFIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGRYSD 1388

  Fly  1222 EKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVD 1286
            |.:|..||...|...||..|.||..:.||||.|.|||||||||||||:||::|:||:|||||.:|
  Rat  1389 EDIWRTLELSHLSAFVSSQPTGLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAID 1453

  Fly  1287 PQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNL 1351
            .:||.|||.|||::|.|||||||||||:||:|.::|:|:|.|.|.||.||..|:....  :|:.:
  Rat  1454 LETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIAAGG--IFYGM 1516

  Fly  1352 VNQSGRA 1358
            ...:|.|
  Rat  1517 AKDAGLA 1523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 473/1353 (35%)
ABC_membrane 171..437 CDD:294371 81/269 (30%)
ABCC_MRP_domain1 499..699 CDD:213217 98/201 (49%)
ABC_membrane 799..1045 CDD:294371 67/250 (27%)
ABCC_MRP_domain2 1115..1336 CDD:213211 128/221 (58%)
Abcc3NP_542148.2 MRP_assoc_pro 7..1522 CDD:188098 476/1369 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345007
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.660

Return to query results.
Submit another query.