Sequence 1: | NP_001260823.1 | Gene: | l(2)03659 / 47905 | FlyBaseID: | FBgn0010549 | Length: | 1374 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_066388.1 | Gene: | Cftr / 12638 | MGIID: | 88388 | Length: | 1476 | Species: | Mus musculus |
Alignment Length: | 1487 | Identity: | 403/1487 - (27%) |
---|---|---|---|
Similarity: | 714/1487 - (48%) | Gaps: | 254/1487 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 86 LPENPRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCASWERELKNDG 150
Fly 151 RSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQPIFLVKLISYFSGEPDAANA-GFYYAVAQI 214
Fly 215 VISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGALGDTTSGHVVNLISNDIPRLDS 279
Fly 280 APYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTRTSAIQLKAAERTDNR 344
Fly 345 IRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYIRGFDFARRIVLSRVAIFLSLV 409
Fly 410 GY-----VILGKVFTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLTSIRRVEQFMQSEELGS 469
Fly 470 SDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAKW----------------------DPNS 512
Fly 513 PDYT---------LSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTS 568
Fly 569 QESWLFSGTVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARIS 633
Fly 634 LARSVYRKASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANG 698
Fly 699 QIKALG----------DYESLL-------------KTGLITG----------------------- 717
Fly 718 ------------LGSLSKTDKAKTEEQEPLNLNS-----PDNKNEVTPIKENSEQTVGGS----- 760
Fly 761 --------------------SSGKEHVERQESGGISLAL-------------------------- 779
Fly 780 --------------------------YRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFLTYWV 818
Fly 819 KKESTAAGHGEMEDMESKSMDVYKYTLII-------ILSVIMNLSSSFLLFNIAK---------K 867
Fly 868 ASIRLHNTIFNRVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVI 932
Fly 933 ANVNPLLLVPTLMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDAQRV 997
Fly 998 LEKEFDSYQDAHSSAFFMYISTSQAFGYCMNCICVIYISIIT-LSFFAFPPGNGADVGLVITQAM 1061
Fly 1062 GLIDMVQWGVRQTAELENTMTAVERVVEYESIEPEGMLEAPDDKKPPK----------------- 1109
Fly 1110 -TWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRLSYTD 1173
Fly 1174 GSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYSDEKLWGCLEEVKLKEVVS 1238
Fly 1239 DLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRD 1303
Fly 1304 CTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLVNQSGRASY 1360 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l(2)03659 | NP_001260823.1 | CFTR_protein | 89..1343 | CDD:273530 | 400/1465 (27%) |
ABC_membrane | 171..437 | CDD:294371 | 74/271 (27%) | ||
ABCC_MRP_domain1 | 499..699 | CDD:213217 | 88/230 (38%) | ||
ABC_membrane | 799..1045 | CDD:294371 | 73/262 (28%) | ||
ABCC_MRP_domain2 | 1115..1336 | CDD:213211 | 78/220 (35%) | ||
Cftr | NP_066388.1 | CFTR_protein | 1..1464 | CDD:273530 | 403/1487 (27%) |
ABC_membrane | 85..303 | CDD:294371 | 59/218 (27%) | ||
ABCC_CFTR1 | 389..670 | CDD:213258 | 94/280 (34%) | ||
CFTR_R | 639..844 | CDD:291094 | 18/204 (9%) | ||
Disordered R region. /evidence=ECO:0000250|UniProtKB:P13569 | 654..826 | 15/171 (9%) | |||
ABC_membrane | 861..1142 | CDD:279056 | 81/290 (28%) | ||
ABCC_CFTR2 | 1204..1464 | CDD:213256 | 83/246 (34%) | ||
Interaction with GORASP2. /evidence=ECO:0000250|UniProtKB:P13569 | 1382..1476 | 14/66 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1446..1476 | 403/1487 (27%) | |||
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P13569 | 1474..1476 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167841715 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0054 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D138195at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24223 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.850 |