DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)03659 and tap2

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:XP_002942649.3 Gene:tap2 / 100489020 XenbaseID:XB-GENE-481680 Length:728 Species:Xenopus tropicalis


Alignment Length:637 Identity:153/637 - (24%)
Similarity:304/637 - (47%) Gaps:65/637 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   736 NLNSPDNKNEVTPIKENSEQTVGGSSSGKEHVERQESGGISLALYRKYFQAGGGLVAFLVMLSSS 800
            :|.||:    :.|.|     :..|.::.|   :|:....|.|..|        .:..:|.:..:.
 Frog   128 DLVSPN----ILPNK-----SAEGEANSK---KRERENFIRLLKY--------SIPDWLPLCGAF 172

  Fly   801 VLAQVAVTGGDYFLTYWVKK--ESTAAGHGEMEDMESKS-MDVYKYTLIIILSVIMNLSSSFLLF 862
            |...:|:. |:.|:.|::.:  :..:..:.|.|.:.:.| |.::..|    .|:.........:|
 Frog   173 VFLTLALI-GEMFIPYYMGRVIDILSTNYNEREFLRAMSFMAMFSIT----SSIFAGSRGGLFMF 232

  Fly   863 NIAKKASIRLHNTIFNRVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAG 927
            ::|:... ||...:|..|.:.::.||...|.|.|.:|.|.|.::|...:...:...:::.:...|
 Frog   233 SLARLTQ-RLRLLLFRSVIKQEIAFFEATKSGDITSRLTNDTARVSRSIAANVNITLRMLVKCVG 296

  Fly   928 IIIVIANVNPLLLVPTLMLSVIFYHLRNLYLKTSRDL-KRV-EAINRSPVYSHLAAS-LNGLTTI 989
            :...:.:::..|.:.|.:.|.:.:.::.:|....:|| ||| ::|.||   |.||.. :..:..:
 Frog   297 VYSFMFSLSWQLTLLTFISSPLTWIIQKVYNYYHQDLVKRVQDSIARS---SELAKEIIESVRNV 358

  Fly   990 RALDAQRVLEKEFD-SYQDAH------SSAFFMYISTSQAFGYCMNCICVIYISIITLSFFAFPP 1047
            .:..|:....|.:: |.|:.|      .....:|:..::..........:.|..|:..|.|.   
 Frog   359 YSFAAEEEEAKRYENSLQETHVLQTRRDFVTALYLLVTRLVNLGTQVTMLYYGQILIRSGFI--- 420

  Fly  1048 GNGADVGLVITQAMGLIDMVQWGVRQTAELENTMTAVERVVEYESIEPE----GMLEAPDDKKPP 1108
            .:|..|..::.| |.....::..|...:|:.:...|.|:|.:|...||:    |.|       .|
 Frog   421 SSGKMVSFILYQ-MESDSYIRTLVHMLSEITHAAGAAEKVFQYLDREPQVSASGCL-------CP 477

  Fly  1109 KTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKSSLINALFRL-SYT 1172
            .|.  ||...|..:...| |:......|:::||.:.|.....:||.:|.||::.::.|.|. ...
 Frog   478 GTL--QGRFEFSNVTFSY-PSRPEILALQNVSFTLPPGSVTALVGPSGGGKTTCVSLLERFYEPQ 539

  Fly  1173 DGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYS--DEKLWGCLEEVKLKE 1235
            .|::|:|.:..::.....|..:::::.||||||:|::|.|:. :..|:  :|||.....:.|.::
 Frog   540 GGNILLDGKPLKEYKHEYLHSKVALVAQEPVLFAGSVRENIS-YGLYNIPEEKLKAAARKAKAED 603

  Fly  1236 VVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSK 1300
            .:..:.....:.:...|...|.||:|.|.||||:.|:.::|::|||::.:|.:|:..||.:::| 
 Frog   604 FIEGMEKAYDTDVGNSGAQLSAGQKQRVALARALARKPKLLILDEASSCLDAETEHEIQKSLQS- 667

  Fly  1301 FRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLV 1352
            ..|.::|.|||||.|:..:|:::|::||.:||.|:..:|:.|....:..:||
 Frog   668 IEDLSLLIIAHRLRTVQKADQILVLEAGNLVEQGTHEKLVQKXRECITVSLV 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 150/626 (24%)
ABC_membrane 171..437 CDD:294371
ABCC_MRP_domain1 499..699 CDD:213217
ABC_membrane 799..1045 CDD:294371 52/258 (20%)
ABCC_MRP_domain2 1115..1336 CDD:213211 68/223 (30%)
tap2XP_002942649.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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