DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)03659 and abcc10

DIOPT Version :9

Sequence 1:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001135594.1 Gene:abcc10 / 100216149 XenbaseID:XB-GENE-6465377 Length:1501 Species:Xenopus tropicalis


Alignment Length:1432 Identity:433/1432 - (30%)
Similarity:716/1432 - (50%) Gaps:196/1432 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KDESLSVNTSPPLVCRKC---------------FELGHQTENCKQKLTVNSENNSAQNEKEKVLP 87
            :|.:.|....|.|:.|.|               |.||.:.......|:||::::.          
 Frog   153 QDGATSQPLHPILLSRFCLLCLRLCCIFVYLGAFLLGLRCFRPSLSLSVNADDDD---------- 207

  Fly    88 ENPRARS--------------NFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDI----- 133
            |:|...|              :::|...:.:..|:.|:|.|..|          :...|:     
 Frog   208 ESPLLTSFYTPERQHPAEDGESWLSRFFYLWLNPLLRQGARGGL----------KHPGDVLLLPH 262

  Fly   134 -LGN-RLCASWERELKNDGRSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQ---PIFLVKLI 193
             ||. |:|..::      .:|.|.:..||.......|....|:.:::||..||.   |:.|..|:
 Frog   263 CLGTARICQHFQ------SKSSSTILRLLPTLHASFGARYYALGLLKLGAVTLAFLGPLLLNLLV 321

  Fly   194 SYFSGEPDAANAGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGAL 258
            ::.....:..:.|..|.:.......|..::....|..::.:...:|.::.:.::|||:|.....|
 Frog   322 NFMEAADEPLSWGILYTLGLFSSCFLAALLQNQFTHEVNKLILAVRASVLTSVYRKAIRGVGTGL 386

  Fly   259 GDTTSGHVVNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQ 323
            ...:.|.:||.:|.|..|:.:...:.|.:|..|||..|..||:|.::||:.:.|:...:|.:||.
 Frog   387 AGFSKGEIVNFMSTDADRISNFCRSFHEVWSLPLQFSVTLYLLYLQVGIAFLGGLGLAVLLLPIN 451

  Fly   324 MYLGTRTSAIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYI 388
            ..:..|............|.|::::.|::|.::|:|.|.||:.|.:.||..||||:.::|..:  
 Frog   452 KVIANRIVDYNSDLLNHKDARVKLMTELLSGMRVVKFYTWEKHFAEAVTSLREKELRSLRALK-- 514

  Fly   389 RGFDFARRIVLSRVAIFL-----------SLVGYVILGKVFTPEIAFMITAYYNVLLAAMSIYVP 442
                     :|..|.::|           :.:.||:||...|....|...|...:|:..::.: |
 Frog   515 ---------MLDAVCVYLWAALPVLISIITFITYVLLGHQLTAAKVFTALALVGMLILPLNNF-P 569

  Fly   443 SAIIQTAQFLTSIRRVEQFMQSEELGSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAK 507
            ..:....:...|:.|::.||   :|...|.....|::     ||::.:      ||:.:|.....
 Frog   570 WVLNGVLEAKVSLERIQLFM---DLPEQDLLNYYSQE-----PPADPS------SALELRSAAFS 620

  Fly   508 WDP----NSPDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNG---SLS 565
            |.|    :|....|...:|.::.|.:|.|:|..|.|||||:.|:.|||..:.|:|..:.   ...
 Frog   621 WMPEESEDSGSLQLFIEHLSVQKGVLVGVVGKVGCGKSSLLAALTGELSRSGGELFASHQELGFG 685

  Fly   566 YTSQESWLFSGTVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKA 630
            :.:||.|:...|:|:|||||:..:.:.|:.|::.|||..|..:||..|.|.|||.|.||||||||
 Frog   686 FAAQEPWIQFATIRENILFGKEFNGKLYQGVLEACALNDDLSILPSGDQTEVGENGVTLSGGQKA 750

  Fly   631 RISLARSVYRKASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVIL 695
            |::|||:||:...||||||||:||||.||.||.::|:.|.|:..|.:|.||:.:.|...|.::::
 Frog   751 RLALARAVYQDKDIYLLDDPLAAVDADVAAHLMEKCILGILKNKTRILCTHRTELLDKADIVLLM 815

  Fly   696 ANGQIKALGDYESLLKTGLI-----------TGLGSLSKTDKAKTEEQEPLNLNSPDNKNEVTPI 749
            ..|::...|..:.:|.  |:           |.:..:|:..:...||.|      .:.:||..||
 Frog   816 EGGKMVGSGTPDKILP--LVESSRNRGSRGQTQMNHISQAAEQSLEEDE------EEAENEGNPI 872

  Fly   750 KENSEQTVGGSSSGKEHVERQESGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFL 814
            :..:.:.      |:|  |:|| |.::|.:|..|::|.||.:|..|:| :..|.|.:....|::|
 Frog   873 QPITAEV------GQE--EKQE-GAVALQVYWAYWKAVGGCLAGSVLL-ALFLMQASRNISDWWL 927

  Fly   815 TYWVKKESTAAGHGEMEDM-----------------------------ESKSMDVYKYTL----I 846
            ::|:.....:..:..:.::                             ::.|:|:..|..    |
 Frog   928 SHWISSLQDSPRNVSLTNLTPSSFPSASLLLFSQGGLVSPISSVHSAEKNSSLDITFYLSVYGGI 992

  Fly   847 IILSVIMNLSSSFLLFNIAKKASIRLHNTIFNRVTRADMHFFSINKHGSILNRFTKDMSQVDEVL 911
            .:.:.|.....:||.......|::.:|..:.:.|.:|.:.||.....|.|:|||:.|:..||:.|
 Frog   993 AVANSIFTALRAFLFALGTVHAAVVIHRRLLSSVLQATVSFFDSTPIGRIINRFSSDLYCVDDSL 1057

  Fly   912 PVVLVDVMQIALWLAGIIIVIANVNPLLLVPTLMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVY 976
            |.||...:.....|.|::::|:...|.:|...|.|.:::|:|:..|..:||:|||:::|..||:|
 Frog  1058 PFVLNIFLAFTFGLLGMLVMISYGLPWILPVLLPLCLLYYYLQRFYRHSSRELKRLQSITLSPIY 1122

  Fly   977 SHLAASLNGLTTIRALDAQRVLEKEFDSYQDAHSSAFFMYISTSQAFGYCMNCICVIY---ISII 1038
            :|.:.:|.|||||||.......|.|..|..:.:....|...:..|.....:..|.|:.   ||:|
 Frog  1123 THFSETLTGLTTIRATRHADRFEAECVSRLEVNQRCMFASNAAVQWLDIRLQMIGVMVVAAISVI 1187

  Fly  1039 TLSFFAFPPGNGADVGLVITQAMGLIDMVQWGVRQTAELENTMTAVERVVEYESIEP----EGML 1099
            .:.......|:...|||.::.|:.:..::...:....:.|..|.:|||..||.:..|    ||.|
 Frog  1188 AIIQHQRKSGDPGLVGLALSYALSITGILSGLISSFTQTEAMMVSVERTEEYSTTLPSESAEGSL 1252

  Fly  1100 EAPDDKKPPKTWPEQGEIIFKELNLRY---TPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKSS 1161
            :...|      ||..|.|.|:.:.|.|   .|||     |..:||.|.|.||:|||||||:|||:
 Frog  1253 QVELD------WPTNGHIEFRNVVLCYRLGLPNA-----LDGISFTISPGEKIGIVGRTGSGKST 1306

  Fly  1162 LINALFR-LSYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYSDEKLW 1225
            |..|||| :...:||:|||...:..:.|..||.:::||||:..||||::|.||||...::|.::.
 Frog  1307 LFLALFRMMELKEGSILIDNVPSHLLNLELLRSRLAIIPQDAFLFSGSVRVNLDPLSYHTDVEIL 1371

  Fly  1226 GCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTD 1290
            ..|::..|::||..: .||.:.:.:.|.|||:|||||:|||||:|...:||.:|||||:||.|||
 Frog  1372 KVLDQCHLQDVVRRI-GGLDADVGDRGKNFSLGQRQLLCLARALLTHAKILCIDEATASVDHQTD 1435

  Fly  1291 GLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLVNQS 1355
            .|:|.|||.:||:.|||||||||:||:|||:|:||.||::||..||..|..:.||. |:.|:: |
 Frog  1436 ELLQRTIRERFRERTVLTIAHRLNTIMDSDRVLVMHAGKLVELDSPANLSKREDSN-FYRLIH-S 1498

  Fly  1356 GR 1357
            |:
 Frog  1499 GQ 1500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 414/1350 (31%)
ABC_membrane 171..437 CDD:294371 68/279 (24%)
ABCC_MRP_domain1 499..699 CDD:213217 85/206 (41%)
ABC_membrane 799..1045 CDD:294371 68/281 (24%)
ABCC_MRP_domain2 1115..1336 CDD:213211 113/224 (50%)
abcc10NP_001135594.1 MRP_assoc_pro 180..1484 CDD:188098 420/1385 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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