DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTry and Prss2l1

DIOPT Version :10

Sequence 1:NP_524904.1 Gene:betaTry / 47901 FlyBaseID:FBgn0010357 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_003749780.1 Gene:Prss2l1 / 683849 RGDID:1597830 Length:246 Species:Rattus norvegicus


Alignment Length:253 Identity:90/253 - (35%)
Similarity:136/253 - (53%) Gaps:25/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LILLSAVACALGGTIPEGLLPQLDGRIVGGTATTISSFPWQISLQRSGSHSCGGSIYSARVIVTA 69
            |::|:.|..|:...:.:      |.:||||.....:|.|:|:|| .||.|.||||:.:.:.:|:|
  Rat     4 LLILALVGTAVAFPVDD------DDKIVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSA 61

  Fly    70 AHCLQSVSASSLQIRAGSSYWSSGGVVAKVSSFKN------HEGYNANTMVNDIAVLHLSSSLSF 128
            |||.:    |.:|:|.|.   .:..|:.....|.|      |..::..|:.|||.::.|||.:..
  Rat    62 AHCYK----SRIQVRLGE---HNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKL 119

  Fly   129 SSTIKAIGLASSNPANGAAASVSGWGTESSGSSSIPSQLRYVNVNIVSQSRCSSSSYGYGNQIKS 193
            ::.:..:.|.||....|....:||||...|...:.|..|:.::..::.|:.|.:|   |..:|..
  Rat   120 NARVATVALPSSCAPAGTQCLISGWGNTLSFGVNEPDLLQCLDAPLLPQADCEAS---YPGKITD 181

  Fly   194 SMICA--FASGKDSCQGDSGGPLVSGGVLVGVVSWGYGCAAANYPGVYADVAALRSWV 249
            :|:||  ...||||||||||||:|..|.|.|:||||||||..:.||||..|.....|:
  Rat   182 NMVCAGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTryNP_524904.1 Tryp_SPc 30..249 CDD:214473 84/226 (37%)
Prss2l1XP_003749780.1 Tryp_SPc 24..242 CDD:238113 85/227 (37%)

Return to query results.
Submit another query.