DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTry and Sems

DIOPT Version :10

Sequence 1:NP_524904.1 Gene:betaTry / 47901 FlyBaseID:FBgn0010357 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster


Alignment Length:263 Identity:80/263 - (30%)
Similarity:124/263 - (47%) Gaps:16/263 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKFLILLSAV-----ACALGGTIPEGLL------PQLDGRIVGGTATTISSF-PWQISLQRSGSH 54
            |.||.||:.:     |.....||....|      |....|::||..||.:.. .:.::::...:.
  Fly     4 LLFLFLLAGILINNHALQHNETIDLKKLAKIVLPPAYQTRVIGGRVTTNAKLGGYLVAMRYFNNF 68

  Fly    55 SCGGSIYSARVIVTAAHCLQS-VSASSLQIRAGSSYWSSGGVVAKVSSFKNHEGYNANTMVNDIA 118
            .|||::....:::|||||.:. ....:..:..|.|..|..|:..:|..|.....:...||..|:|
  Fly    69 ICGGTLIHELIVLTAAHCFEDRAEKEAWSVDGGISRLSEKGIRRQVKRFIKSAQFKMVTMNMDVA 133

  Fly   119 VLHLSSSLSFSSTIKAIGLASSNPANGAAASVSGWGTESSGSSSIPSQLRYVNVNIVSQSRCSSS 183
            |:.|:..: ....|..:.|.|:....|....|||||..:.........||.|:|.::.:..| ..
  Fly   134 VVLLNRPM-VGKNIGTLSLCSTALTPGQTMDVSGWGMTNPDDEGPGHMLRTVSVPVIEKRIC-RE 196

  Fly   184 SYGYGNQIKSSMICAFASG-KDSCQGDSGGPLVSGGVLVGVVSWGYGCAAANYPGVYADVAALRS 247
            :|.....|..||.||...| ||:|..|||||||....:.|:||:|.|||:..|||||.||..::.
  Fly   197 AYRESVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFGIGCASRRYPGVYTDVHYVKP 261

  Fly   248 WVI 250
            :::
  Fly   262 FIV 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTryNP_524904.1 Tryp_SPc 30..249 CDD:214473 70/221 (32%)
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 70/221 (32%)

Return to query results.
Submit another query.