DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTry and CG18223

DIOPT Version :10

Sequence 1:NP_524904.1 Gene:betaTry / 47901 FlyBaseID:FBgn0010357 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_649077.1 Gene:CG18223 / 40068 FlyBaseID:FBgn0036832 Length:322 Species:Drosophila melanogaster


Alignment Length:227 Identity:59/227 - (25%)
Similarity:101/227 - (44%) Gaps:43/227 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SHSCGGSIYSARVIVTAAHCLQS----VSASS-LQIRAGSSYWSSGGVVAKVSSFKNHEGYNANT 112
            :|.|||.|.|...|:|:|||...    |..|. |.:.||::           :..|:.:|.:.|.
  Fly    76 NHFCGGVIISRTYILTSAHCAMDKRKIVHRSRVLVVVAGTT-----------NRLKSRKGLSLNM 129

  Fly   113 MV--------------NDIAVLHLSSSLSFSS-TIKAIGLASSNPANGAAASVSGWGTESSGSSS 162
            .|              |:||::.|:..|...: .:..|.|.:::|..|...:|.|||....| ..
  Fly   130 EVKKIFVPDKFTVFNTNNIALMMLAKKLPLDNPLVGVINLPTADPEPGLNYTVLGWGRIFKG-GP 193

  Fly   163 IPSQLRYVNVNIVSQSRCSSSSYGYGNQIKSSMICA----FASGKDSCQGDSGGPLVSGGVLVGV 223
            :.|.:.:::|.::.:..|....:.:    |..|:||    ....::.|.||:|.||:....:.||
  Fly   194 LASDILHIDVELLPRDICEKKVHIF----KEEMMCAGNLNNTMDENPCAGDTGSPLIFNETVFGV 254

  Fly   224 VSWGYGCAAANYPGVYADVAALRSW---VINN 252
            ||:..||.:...|.:|.:|.....|   ::||
  Fly   255 VSYRVGCGSKTLPSIYTNVYMHMDWINGIMNN 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTryNP_524904.1 Tryp_SPc 30..249 CDD:214473 57/222 (26%)
CG18223NP_649077.1 Tryp_SPc 60..280 CDD:214473 56/219 (26%)

Return to query results.
Submit another query.