DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTry and Elane

DIOPT Version :10

Sequence 1:NP_524904.1 Gene:betaTry / 47901 FlyBaseID:FBgn0010357 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001100237.1 Gene:Elane / 299606 RGDID:1307968 Length:271 Species:Rattus norvegicus


Alignment Length:239 Identity:66/239 - (27%)
Similarity:116/239 - (48%) Gaps:33/239 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PQLDGRIVGGTATTISSFPWQISLQRSGSHSCGGSIYSARVIVTAAHCLQSVSASSLQIRAGSSY 89
            |.|...||||......::|:.:||||.|.|.||.::.:...:::||||:...:..|:|:..|:..
  Rat    27 PALASEIVGGRPAQPHAWPFMVSLQRRGGHFCGATLIARNFVMSAAHCVNGRNFQSVQVVLGAHD 91

  Fly    90 WSSGGVVAKVSS----FKNHEGYNANTMVNDIAVLHLSSSLSFSSTIKAIGLASSNPANGAAAS- 149
            ........::.|    |:|  |::.:.::|||.::.|:.|.:.::.::...|    ||.|.... 
  Rat    92 LRRREPTRQIFSVQRIFEN--GFDPSRLLNDIVIIQLNGSATINANVQVAEL----PAQGQGVGN 150

  Fly   150 -----VSGWGTESSGSSSIPSQLRYVNVNIVSQSRCSSSSYGYGNQIKSSMICAFASGKDS--CQ 207
                 ..|||...: :..:||.|:.:||.:|: :.|.          :...:|.....:.:  |.
  Rat   151 RTPCVAMGWGRLGT-NRPLPSVLQELNVTVVT-NLCR----------RRVNVCTLVPRRQAGICF 203

  Fly   208 GDSGGPLVSGGVLVGVVSW--GYGCAAANYPGVYADVAALRSWV 249
            ||||||||...::.|:.|:  | ||.:..||..:|.||....|:
  Rat   204 GDSGGPLVCNNLVQGIDSFIRG-GCGSGFYPDAFAPVAEFADWI 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTryNP_524904.1 Tryp_SPc 30..249 CDD:214473 63/232 (27%)
ElaneNP_001100237.1 Tryp_SPc 33..249 CDD:238113 64/233 (27%)

Return to query results.
Submit another query.