DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTry and LOC102554637

DIOPT Version :9

Sequence 1:NP_001286314.1 Gene:betaTry / 47901 FlyBaseID:FBgn0010357 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_017448472.2 Gene:LOC102554637 / 102554637 RGDID:7618053 Length:246 Species:Rattus norvegicus


Alignment Length:256 Identity:90/256 - (35%)
Similarity:137/256 - (53%) Gaps:25/256 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKFLILLSAVACALGGTIPEGLLPQLDGRIVGGTATTISSFPWQISLQRSGSHSCGGSIYSARVI 66
            ::.|::|..|..|:...:.:      |.:||||......|.|:|:|| .||.|.||||:.:.:.:
  Rat     1 MRALLVLVLVGAAVAFPVDD------DDKIVGGYTCQEHSVPYQVSL-NSGYHYCGGSLINDQWV 58

  Fly    67 VTAAHCLQSVSASSLQIRAGSSYWSSGGVVAKVSSFKN------HEGYNANTMVNDIAVLHLSSS 125
            |:||||.:    |.:|:|.|.   .:..|:.....|.|      |..::..|:.|||.::.|||.
  Rat    59 VSAAHCYK----SRIQVRLGE---HNINVLEGDEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSP 116

  Fly   126 LSFSSTIKAIGLASSNPANGAAASVSGWGTESSGSSSIPSQLRYVNVNIVSQSRCSSSSYGYGNQ 190
            :..::.:..:.|.||....|....:||||...|...:.|..|:.::..::.|:.|.:|   |..:
  Rat   117 VKLNARVATVALPSSCAPAGTQCLISGWGNTLSFGVNDPDLLQCLDAPLLPQADCEAS---YPGK 178

  Fly   191 IKSSMICA--FASGKDSCQGDSGGPLVSGGVLVGVVSWGYGCAAANYPGVYADVAALRSWV 249
            |.::|:||  ...||||||||||||:|..|.|.|:||||||||..:.||||..|.....|:
  Rat   179 ITNNMVCAGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTryNP_001286314.1 Tryp_SPc 30..249 CDD:214473 84/226 (37%)
Tryp_SPc 31..252 CDD:238113 85/227 (37%)
LOC102554637XP_017448472.2 Tryp_SPc 24..242 CDD:238113 85/227 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.