DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTry and LOC100498532

DIOPT Version :9

Sequence 1:NP_001286314.1 Gene:betaTry / 47901 FlyBaseID:FBgn0010357 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001333498.1 Gene:LOC100498532 / 100498532 -ID:- Length:251 Species:Xenopus tropicalis


Alignment Length:258 Identity:90/258 - (34%)
Similarity:126/258 - (48%) Gaps:26/258 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLILLSAVACALGGTIPEGLLPQLDGRIVGGTATTISSFPWQISLQRSGSHSCGGSIYSARVIVT 68
            ::::..|||.|       ..|...|.:||||...|..|.|||:....:|.:.||||:.|.|.|::
 Frog     5 WVLMFLAVAAA-------APLDDDDDKIVGGYECTPHSQPWQVLFTYNGGNWCGGSLISPRWIIS 62

  Fly    69 AAHCLQS-------VSASSLQIRAGSSYWSSGGVVAKVSSFKNHEGYNANTMVNDIAVLHLSSSL 126
            ||||.|.       :....|:.:.|:...      .:|.:...|.||......:||.::.|:...
 Frog    63 AAHCYQPPKTLVALLGEHDLKKKEGTEQH------IQVEAAYKHFGYKDKAHDHDIMLVKLAKPA 121

  Fly   127 SFSSTIKAIGLASSNPANGAAASVSGWGTESSGSSSIPSQLRYVNVNIVSQSRCSSSSYGYGNQI 191
            .::..::.|.:|.|.|.:||...|||:|.....:...|.||:.:.|.|||.|.|.:|   |...|
 Frog   122 QYNQYVQPIPVARSCPTDGAKCLVSGFGNVLGYNVRYPDQLQCLEVPIVSDSSCKAS---YPRMI 183

  Fly   192 KSSMICA--FASGKDSCQGDSGGPLVSGGVLVGVVSWGYG-CAAANYPGVYADVAALRSWVIN 251
            ..:|.||  ...||.||.|||||||:..|.|.|.||||.. |.:.|.|||||.|.....|:.|
 Frog   184 SENMFCAGFLEGGKGSCHGDSGGPLICNGELYGAVSWGGSYCISKNSPGVYAKVCNYLDWIKN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTryNP_001286314.1 Tryp_SPc 30..249 CDD:214473 82/228 (36%)
Tryp_SPc 31..252 CDD:238113 84/231 (36%)
LOC100498532NP_001333498.1 Tryp_SPc 25..247 CDD:238113 84/231 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.