DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTry and gzm3.4

DIOPT Version :9

Sequence 1:NP_001286314.1 Gene:betaTry / 47901 FlyBaseID:FBgn0010357 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001108167.1 Gene:gzm3.4 / 100001210 ZFINID:ZDB-GENE-070912-136 Length:251 Species:Danio rerio


Alignment Length:258 Identity:75/258 - (29%)
Similarity:118/258 - (45%) Gaps:26/258 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LILLSAVACALGGTIPEGLLPQLDGRIVGGTATTISSFPWQISLQRSGSHSCGGSIYSARVIVTA 69
            :||:|......||         ::..||||....:.|.|:..|||....|:|||.:.....::|:
Zfish     8 IILISYSVIKTGG---------MESGIVGGREVKLHSRPYMASLQVQRKHNCGGILIKEDYVLTS 63

  Fly    70 AHCLQSVSASSLQIRAGS---SYWSSGGVVAKVSSFKNHEGYNANTMVNDIAVLHLSSSLSFSST 131
            |||.:  ..::|::..|:   |...:...:.:|..:..|..|.......||.:|.|.:....:..
Zfish    64 AHCWK--DTTNLEVVLGAHNISQRENSQQIIQVQKYIKHPNYQKKNHSFDIMLLKLKTKAVLNHF 126

  Fly   132 IKAIGLASSNPANGA--AASVSGWGTE--SSGSSSIPSQLRYVNVNIVSQSRCSSSSYGYGNQIK 192
            :....|....|:..|  ..|::|||.:  ..|:|::   ||.||:.:.|.|.|.|....|.|  .
Zfish   127 VNITNLPKHEPSILAPVECSIAGWGMQRPGEGASNV---LREVNLQLESNSYCKSKWQVYFN--S 186

  Fly   193 SSMICAFASGKDS-CQGDSGGPLVSGGVLVGVVSWGY--GCAAANYPGVYADVAALRSWVINN 252
            .:|:|..:.||.: ||||||.||.....|.|:.::.|  .|....||.||..|:|...|:..|
Zfish   187 KNMVCTASDGKKAFCQGDSGSPLFCNSELYGMAAYTYPNNCTFKEYPEVYMKVSAFLPWIKKN 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTryNP_001286314.1 Tryp_SPc 30..249 CDD:214473 68/228 (30%)
Tryp_SPc 31..252 CDD:238113 69/230 (30%)
gzm3.4NP_001108167.1 Tryp_SPc 25..249 CDD:238113 69/230 (30%)
Tryp_SPc 25..246 CDD:214473 68/227 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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