DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf5 and TAF5

DIOPT Version :9

Sequence 1:NP_476957.1 Gene:Taf5 / 47900 FlyBaseID:FBgn0010356 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_197897.3 Gene:TAF5 / 832586 AraportID:AT5G25150 Length:669 Species:Arabidopsis thaliana


Alignment Length:683 Identity:229/683 - (33%)
Similarity:366/683 - (53%) Gaps:64/683 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DVQQVLGAVLGAGDANRERKHVQSPA--------QGHKQSAVTEANAAE--ELAKFI---DDDSF 111
            |.:|:...|:|    ..::|...|.|        |.:..|:.|..:...  ||.|.|   .....
plant     2 DPEQINEFVVG----YLKKKGFSSAAKDLESYHHQNNNGSSFTSVDYHNDPELTKLIRSFSQQED 62

  Fly   112 DAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKAKEFIEKYKCDLDGY 176
            |...|.:.|.:||::..:|||:|||||..|:||:.:..|..::..|..::|:.|...::.|.:..
plant    63 DPTRYREGYSKLRSWAYNSLDLYKHELLRVMYPVFIHCYMDLVGKGHTQEARAFFNSFRKDHEMV 127

  Fly   177 YIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHSLFKRHIQDRRQEVVADIVSKYLHF 241
            ::..|..|..:..|..|.|.:...::.:.|..|:..:.|:.|..:::......::..|::::::|
plant   128 HLRDLQKLEGVLSPSHLEEMEFARSLRKSKVNIKFCQYSYELLLQYLHSTVSTLMLGIINEHINF 192

  Fly   242 DTYEGM---ARNKLQCVATAGSHLGEAKRQDNKMRVYYGLLKE------VDFQTLTTPAPAPEEE 297
            ..|.|.   :.:.::.|...|| ..:.....|:..:.:|||::      .....|.:.:...:.|
plant   193 QVYSGQPTSSSDDIEAVTIVGS-FQDTANHINQKEIQWGLLEDSLEDRLEKTGGLLSDSEKGQGE 256

  Fly   298 DDDPDAPDRPKK-----------KKPKKDPLLSKKSKSDPNAPSIDRI---PLPELKDSDKL--- 345
            ..|.||.|..|:           ||.|||    |...:......::.|   |.|.:|....|   
plant   257 SKDGDADDSKKRSTEIGKQGSSLKKLKKD----KAGNATAKVARLETITVSPAPRVKPELALPVM 317

  Fly   346 ---LKLKALREASKRLALSKDQLPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLT 407
               ::...|.:...|:.||...:||..|||.:|:|.|:.|:.||.|.:::|.||.|||:::|.: 
plant   318 STDVEQSILEDLRNRVQLSSVAMPSVSFYTFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDM- 381

  Fly   408 PAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDS 472
             ||:.  :......:.:.:|:|.::.....||..:   |:||:||||...|:|..:.:||.|.|:
plant   382 -AKIG--QAGSGALQAENDSSDQSIGPNGRRSYTL---LLGHSGPVYSATFSPPGDFVLSSSADT 440

  Fly   473 TIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDV 537
            ||||||....:.:|.|:||.|||||.:|:|.|:||.|||:|:|||:|:.|..|.||:..||||||
plant   441 TIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV 505

  Fly   538 DCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIII 602
            ||||:|||.||:||||||:||||||..||:.||:..||:..|.|||.|..|||:|||..|..|::
plant   506 DCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 570

  Fly   603 WDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHITVSHHQDE 667
            ||||....:|.|:.|.|.|.::::|.:|::||:...|..:.|||   ||.   |..:|.:..::.
plant   571 WDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD---VTS---STKLTKAEEKNG 629

  Fly   668 NDEDVYLMRTFPSKNSPFVSLHFTRRNLLMCVG 700
            |...:..:||||:|::|..:|.|:|||||...|
plant   630 NSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAG 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf5NP_476957.1 TAF5_NTD2 114..245 CDD:176269 31/130 (24%)
WD40 319..674 CDD:225201 148/363 (41%)
WD40 373..646 CDD:238121 126/272 (46%)
WD40 repeat 380..448 CDD:293791 18/67 (27%)
WD40 repeat 454..490 CDD:293791 15/35 (43%)
WD40 repeat 495..531 CDD:293791 20/35 (57%)
WD40 repeat 538..573 CDD:293791 25/34 (74%)
WD40 repeat 579..615 CDD:293791 18/35 (51%)
TAF5NP_197897.3 TFIID_NTD2 64..188 CDD:398277 30/123 (24%)
WD40 repeat 357..416 CDD:293791 18/65 (28%)
WD40 414..663 CDD:238121 127/255 (50%)
WD40 repeat 422..458 CDD:293791 15/35 (43%)
WD40 repeat 463..499 CDD:293791 20/35 (57%)
WD40 repeat 506..541 CDD:293791 25/34 (74%)
WD40 repeat 547..583 CDD:293791 18/35 (51%)
WD40 repeat 589..622 CDD:293791 12/38 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 68 1.000 Domainoid score I3484
eggNOG 1 0.900 - - E2759_KOG0263
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5064
Inparanoid 1 1.050 381 1.000 Inparanoid score I535
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D620721at2759
OrthoFinder 1 1.000 - - FOG0003655
OrthoInspector 1 1.000 - - oto4087
orthoMCL 1 0.900 - - OOG6_102926
Panther 1 1.100 - - LDO PTHR19879
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3022
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

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