DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf5 and taf5l

DIOPT Version :9

Sequence 1:NP_476957.1 Gene:Taf5 / 47900 FlyBaseID:FBgn0010356 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_956146.1 Gene:taf5l / 334055 ZFINID:ZDB-GENE-030131-5987 Length:601 Species:Danio rerio


Alignment Length:682 Identity:200/682 - (29%)
Similarity:311/682 - (45%) Gaps:145/682 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LCQEANVSSVELSEISESDVQQVLGAVLGAGDANRERKHVQSPAQGHKQSAVTEANAAEELAKFI 106
            |.|.|...:..|:..:||....|:.|               :|.|.                   
Zfish    34 LSQTAEEMAASLTVQTESSCANVVSA---------------APCQA------------------- 64

  Fly   107 DDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKAKEFIEKYKC 171
                 |.|.||..:..||:|::::......|.|.||:|:.:.::..:...||           |.
Zfish    65 -----DPQQYENQFSRLRSFLQEAEGPLVKEASSVLFPLFLYLHLHMARCGL-----------KG 113

  Fly   172 DLDGYYIEGLFNLLLLSKPE---------------ELLENDLVVAMEQDKFVIRMSRDSHSLFKR 221
            .||.:|  ..|:.|....||               ::..|..:.|:...|:|:.::..::|...|
Zfish   114 ALDSFY--SRFHSLFQQDPEQKAIVDLLRGALTLQDVTTNPKLCALLDHKYVVHLTDQAYSYLLR 176

  Fly   222 HIQDRRQEVVADIVSKYLHFDTYEGMARNKLQCVATAGSHLGEAKRQDNKMRVYYGLLKEVDFQT 286
            ::|......:..:::.:|..:. ....|...|..   |:.:|......:....:..:......:.
Zfish   177 YLQSEDNSAICWVLTAHLQVEV-TAAQRTDYQLY---GAGVGTGNTSSSSSSTWASVDGSEGAER 237

  Fly   287 LTTPAPAPEEEDDDPDAPDRPKKKKPKKDPLLSKKSKSDPNAPSIDRIPLPELKDSDKLLKLKAL 351
            |..||..|:.|                                                ..|:.|
Zfish   238 LEVPAGLPQNE------------------------------------------------AALENL 254

  Fly   352 REASKRLALSKDQLPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRT--- 413
            ::..||:......|.:..||...::.|.:..||:|.||.:||.||.:|:|::|||...||:.   
Zfish   255 QDCIKRVREGPPSLTTVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKLKAGPH 319

  Fly   414 LKDADSLR----ELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTI 474
            ..|...:|    .|::|:.|      :|.||...::|.||:|||||.||..:.:.|||||||||:
Zfish   320 KADVSKIRLACDVLEEEADD------EDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTV 378

  Fly   475 RLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDC 539
            |.|.|.:::..|.||||.||||||..:|...||.:.|:|:|||||:......||::.||||||||
Zfish   379 RYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDC 443

  Fly   540 VQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWD 604
            |:|||||||:||||:|:|||||....|.||||.|||:|.|.:||||..|:||||...|..:.:||
Zfish   444 VKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWD 508

  Fly   605 LSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHITVSHHQDEND 669
            |::|.|...|..||.|:::::||:|.:::|:|.:||.:.:||            |..:|.....|
Zfish   509 LASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWD------------IRNAHGSAPTD 561

  Fly   670 E-DVYLMRTFPSKNSPFVSLHFTRRNLLMCVG 700
            . ...|:..:....|..:::.|...|||:..|
Zfish   562 GCSSELIGQYTGSTSNILNVQFMACNLLLVTG 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf5NP_476957.1 TAF5_NTD2 114..245 CDD:176269 29/145 (20%)
WD40 319..674 CDD:225201 144/362 (40%)
WD40 373..646 CDD:238121 132/279 (47%)
WD40 repeat 380..448 CDD:293791 25/74 (34%)
WD40 repeat 454..490 CDD:293791 18/35 (51%)
WD40 repeat 495..531 CDD:293791 16/35 (46%)
WD40 repeat 538..573 CDD:293791 25/34 (74%)
WD40 repeat 579..615 CDD:293791 16/35 (46%)
taf5lNP_956146.1 TAF5_NTD2 66..200 CDD:176269 29/147 (20%)
WD40 <227..581 CDD:225201 151/419 (36%)
WD40 289..593 CDD:238121 140/321 (44%)
WD40 repeat 357..394 CDD:293791 19/36 (53%)
WD40 repeat 400..436 CDD:293791 15/35 (43%)
WD40 repeat 441..477 CDD:293791 26/35 (74%)
WD40 repeat 484..519 CDD:293791 15/34 (44%)
WD40 repeat 525..572 CDD:293791 13/58 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52000
OrthoDB 1 1.010 - - D230914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR19879
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1472
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.