DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf5 and taf5

DIOPT Version :9

Sequence 1:NP_476957.1 Gene:Taf5 / 47900 FlyBaseID:FBgn0010356 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_587902.1 Gene:taf5 / 2539353 PomBaseID:SPCC5E4.03c Length:643 Species:Schizosaccharomyces pombe


Alignment Length:647 Identity:219/647 - (33%)
Similarity:332/647 - (51%) Gaps:89/647 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 AAEELAKFIDDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKA 162
            :.||..|.|::.. ||  |...|..||.:|:.||::||.||..:|:||.|..|..:|:....|.|
pombe    42 SVEEKLKSIEETP-DA--YTHTYTILRDWVDSSLELYKAELHRILFPIFVHSYLNLLSQDHYEAA 103

  Fly   163 KEFIEKYKCDLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDS-----HSLFKRH 222
            |:|.|.:|.|....:...:.||..||.|..:.|:.......|:|:.:..||.:     |.||:. 
pombe   104 KQFYELFKDDHTDLHDFDVKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFDLLLHFLFEN- 167

  Fly   223 IQDRRQEVVADIVSKYLHFDTYEGMAR--------NKLQCVATAGSHLGEAKRQDNKMRVYYGLL 279
             ......::..::::::......|...        |:.:.:.......|:|:.|..|::      
pombe   168 -VSNGGSIIIKLINQHIDIHIVPGRPTVLENAKVINEQEGITGQSFERGDAQLQPVKLQ------ 225

  Fly   280 KEVDFQTLTTPAPAPEE---------EDDDPDAPDRPKKKKPKKDPLLSKKSK-SDPN---APSI 331
                      ..|..:|         |::|....:.|..:.||   ||.:..| .:||   |||.
pombe   226 ----------QMPMDKEMEKIVEMDLEEEDMMHQNDPNNQSPK---LLKEFRKLHEPNAEDAPSR 277

  Fly   332 DRIPLPELKDSDKLLKLKALREASKRLALS-KDQLPSAVFYTVLNSHQGVTCAEISDDSTMLACG 395
            |.||||..|..|.|.:::|:::.||||.|. :..|||...||..:::..:.|||.|.||||:|||
pombe   278 DYIPLPPHKGVDILSEVEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIACG 342

  Fly   396 FGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAP 460
            |.:|.:|:||:...|          :.|.|.::      ::|..|.|  .|:.|:||||...|:|
pombe   343 FQESYIRLWSIKADK----------KSLPKSTS------VEDSDGSV--RLLSHSGPVYGTTFSP 389

  Fly   461 EMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQ 525
            :...|||||||::.||||:.|.:.:|.|:||..|||||.|.|.|:||.:.|:|:||:||:.|...
pombe   390 DNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIY 454

  Fly   526 ALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRY 590
            .||||.|||||||||.|||||.||.|||||:|.||||...|.|||:..||...|:::|.:..|..
pombe   455 PLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHT 519

  Fly   591 LASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVT-EDY 654
            :||...:..|.:||:..|..:.|:..|...:.:::|||:.|||.:.|.|..:..||..|.. .:.
pombe   520 MASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNP 584

  Fly   655 ISNHIT----------VSHHQDEN-----DEDVYLMRTFPSKNSPFVSLHFTRRNLLMCVGL 701
            :|:.:|          .|...:.|     |:.|.|.    :|.:|..::.||||||.:.:.:
pombe   585 VSSSLTGSVVTPFSAKTSTFNEVNWSTSPDQMVALY----TKQTPIFNVSFTRRNLCLAISV 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf5NP_476957.1 TAF5_NTD2 114..245 CDD:176269 37/135 (27%)
WD40 319..674 CDD:225201 152/375 (41%)
WD40 373..646 CDD:238121 118/272 (43%)
WD40 repeat 380..448 CDD:293791 23/67 (34%)
WD40 repeat 454..490 CDD:293791 17/35 (49%)
WD40 repeat 495..531 CDD:293791 19/35 (54%)
WD40 repeat 538..573 CDD:293791 24/34 (71%)
WD40 repeat 579..615 CDD:293791 10/35 (29%)
taf5NP_587902.1 LisH 10..36 CDD:285685
TFIID_NTD2 54..177 CDD:282363 39/127 (31%)
WD40 <316..588 CDD:225201 124/289 (43%)
WD40 repeat 329..377 CDD:293791 23/65 (35%)
WD40 <332..575 CDD:238121 115/260 (44%)
WD40 repeat 383..419 CDD:293791 17/35 (49%)
WD40 repeat 424..460 CDD:293791 19/35 (54%)
WD40 repeat 467..502 CDD:293791 24/34 (71%)
WD40 repeat 508..544 CDD:293791 10/35 (29%)
WD40 repeat 550..590 CDD:293791 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 61 1.000 Domainoid score I2985
eggNOG 1 0.900 - - E2759_KOG0263
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5064
Inparanoid 1 1.050 329 1.000 Inparanoid score I520
OMA 1 1.010 - - QHG52000
OrthoFinder 1 1.000 - - FOG0003655
OrthoInspector 1 1.000 - - mtm9314
orthoMCL 1 0.900 - - OOG6_102926
Panther 1 1.100 - - LDO PTHR19879
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1472
SonicParanoid 1 1.000 - - X3022
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.