DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf5 and Taf5

DIOPT Version :9

Sequence 1:NP_476957.1 Gene:Taf5 / 47900 FlyBaseID:FBgn0010356 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_796316.2 Gene:Taf5 / 226182 MGIID:2442144 Length:801 Species:Mus musculus


Alignment Length:719 Identity:307/719 - (42%)
Similarity:461/719 - (64%) Gaps:47/719 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HDKRELLCLLKLIKKYQLKSTEELLCQEANV---------SSVEL----SEISESDVQQVLGAVL 69
            ||::.||.:|:.:::..|:..||.|.:||.:         :..||    :|.:.:.:.:|..:|.
Mouse    93 HDRQTLLAVLQFLRQSNLREAEEALRREARLLEEAVAGSGAPGELDGAGAEAASALLSRVTASVP 157

  Fly    70 GAGDANRERKHVQSPAQGHKQSAVTEANAAEELAK------FIDD------------DSFDAQHY 116
            |:...       :.|..|...::|...:|:...|.      .::|            ...|...|
Mouse   158 GSAAP-------EPPGTGASVTSVFSGSASGPAAPGKVASVAVEDQPDVSAVLSAYNQQGDPTMY 215

  Fly   117 EQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKAKEFIEKYKCDLDGYYIEGL 181
            |:.|..|:.|:|.|||.::.|||.:.||:.|.:|.:::.:....:||.|.||:..|.:.||.:.|
Mouse   216 EEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDL 280

  Fly   182 FNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHSLFKRHIQDRRQEVVADIVSKYLHFDTYEG 246
            ..|..|:|.|.:..|:.::.....|||:|:||||:.|.|||:|:::...:.:||.::|:.|.::|
Mouse   281 RVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDG 345

  Fly   247 MARNKLQCVATAGSHLGEAKRQDNKMRVYYGLLKEVDFQTLTTPAPAPEEEDDDPDAPDRPKKKK 311
            |.|:|.|..|..||..|||||:.||.:|::|||||.:.:     .|..:|:::..:...:|||||
Mouse   346 MPRSKQQIDAMVGSLAGEAKREANKSKVFFGLLKEPEIE-----VPLDDEDEEGENEEGKPKKKK 405

  Fly   312 PKKDPLLSKKSKSDPNAPSIDRIPLPELKDSDKLLKLKALREASKRLALSKDQLPSAVFYTVLNS 376
            ||||.:.||..|.|||||..:|||||||||||||.|:..::|.:||:.|..|.|||..|||.||:
Mouse   406 PKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNA 470

  Fly   377 HQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGE 441
            :||:|..:::|||:::|.||.||:||:||:||.|||::|.|..|..:||||.|:..|::|:::..
Mouse   471 YQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTAS 535

  Fly   442 VTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYY 506
            ..:.|.||:||||..:|:|:.|.|||.|||.|:|||||.|::|:|.|:||.|||||.:|:|:|||
Mouse   536 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY 600

  Fly   507 FVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRL 571
            |||..:|:.|||||||..|.||:|.|||:||:|.:||||||||||||:||||||||.:.|..||:
Mouse   601 FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRI 665

  Fly   572 MTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAA 636
            .|||||.:.||.||..||:||:|:.|..:::||:.:|.:|..|..||.||.::.|||||.:||:.
Mouse   666 FTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 730

  Fly   637 GLDNNLTLWDFHKVTEDYISNHITVS--H-HQDENDEDVYLMRTFPSKNSPFVSLHFTRRNLLMC 698
            .:||.:.|||..|..||..::..|.:  | :..||.::: |:.|:.:|::|.|.||||||||::.
Mouse   731 SMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQEL-LLGTYMTKSTPVVHLHFTRRNLVLA 794

  Fly   699 VGLF 702
            .|.:
Mouse   795 AGAY 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf5NP_476957.1 TAF5_NTD2 114..245 CDD:176269 47/130 (36%)
WD40 319..674 CDD:225201 190/357 (53%)
WD40 373..646 CDD:238121 148/272 (54%)
WD40 repeat 380..448 CDD:293791 29/67 (43%)
WD40 repeat 454..490 CDD:293791 20/35 (57%)
WD40 repeat 495..531 CDD:293791 22/35 (63%)
WD40 repeat 538..573 CDD:293791 24/34 (71%)
WD40 repeat 579..615 CDD:293791 14/35 (40%)
Taf5NP_796316.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..176 4/19 (21%)
TAF5_NTD2 212..344 CDD:176269 51/131 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..438 32/52 (62%)
WD40 <460..741 CDD:225201 150/283 (53%)
WD 1 469..508 21/38 (55%)
WD40 473..743 CDD:238121 144/272 (53%)
WD40 repeat 474..542 CDD:293791 31/67 (46%)
WD 2 542..581 24/38 (63%)
WD40 repeat 548..584 CDD:293791 23/35 (66%)
WD 3 584..625 26/40 (65%)
WD40 repeat 589..625 CDD:293791 24/35 (69%)
WD 4 626..667 25/40 (63%)
WD40 repeat 632..667 CDD:293791 20/34 (59%)
WD 5 668..707 16/38 (42%)
WD40 repeat 673..709 CDD:293791 14/35 (40%)
WD 6 710..749 12/41 (29%)
WD40 repeat 715..757 CDD:293791 13/44 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850837
Domainoid 1 1.000 130 1.000 Domainoid score I5190
eggNOG 1 0.900 - - E2759_KOG0263
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5064
Inparanoid 1 1.050 591 1.000 Inparanoid score I982
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52000
OrthoDB 1 1.010 - - D230914at33208
OrthoFinder 1 1.000 - - FOG0003655
OrthoInspector 1 1.000 - - oto94756
orthoMCL 1 0.900 - - OOG6_102926
Panther 1 1.100 - - O PTHR19879
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1472
SonicParanoid 1 1.000 - - X3022
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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