DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf5 and taf-5

DIOPT Version :9

Sequence 1:NP_476957.1 Gene:Taf5 / 47900 FlyBaseID:FBgn0010356 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_492169.2 Gene:taf-5 / 172552 WormBaseID:WBGene00006386 Length:648 Species:Caenorhabditis elegans


Alignment Length:693 Identity:200/693 - (28%)
Similarity:337/693 - (48%) Gaps:91/693 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DKRELLCLLKLIKKYQLKSTEELLCQEANVSSVELSEISESDVQQVLGAVLGAGDANRERKHVQS 83
            :...|..::..:::..|..|||||.:||                   |.||....:|        
 Worm    36 NNESLQMIIGYLRRNGLTETEELLTREA-------------------GPVLRVEGSN-------- 73

  Fly    84 PAQGHKQSAVTEANAAEELAKFIDDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQ 148
                         ....|.|..::.|:| .||           ..|..|:.:.|.|.:|:||...
 Worm    74 -------------GLPPEEAISVEFDTF-VQH-----------ANDCTDVVQAEFSQLLFPIFAH 113

  Fly   149 IYFKILASGLREK----AKEFIEKYKCDLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVI 209
            .|..::     ||    |:.|..::|..:...:.|.::.|.|:.....|..|:.|..:.::||::
 Worm   114 SYIALI-----EKHAATARIFFNRFKIFIPECFSEFVYQLSLIEDAMTLRANEHVHILRENKFLV 173

  Fly   210 RMSRDSHSLFKRHIQDRRQEV--VADIVSKYLHFDTYEGMARNKLQCVATAGSHLGEAKRQDNKM 272
            |:||.:    .:|::..:..|  |.:|::|::..:..:.::.|:.......|..||...:.|.:.
 Worm   174 RLSRPT----LKHLESIQTRVIGVKNIIAKHICIENADEVSTNRTTIETQMGGILGVTSKSDKRH 234

  Fly   273 RVYYGLLKEVDFQTLTTPAPAPEEEDDDPDAPDRPKKKKPKKDPLLSKKSKSDPNAPSIDRIPLP 337
            ::.:.:||:...|.:                ..|..|.|..||  :.||.::  :.|..||||||
 Worm   235 KMMFSVLKDELMQNI----------------EKRKTKGKDWKD--MGKKMQT--HCPQADRIPLP 279

  Fly   338 ELKDSDKLLKLKALREASKRLALSKDQLPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVR 402
            .:.:..:..:...||:..|...:|.:...|...||.:|:..||...:.:|||:::|.|..|||:.
 Worm   280 PISEHLREERRNWLRDVGKMAIISAESPVSICMYTTVNAPIGVASCDFTDDSSLIAMGLSDSSIV 344

  Fly   403 IWSLTPA-KLRTLKDADSLRELDKESAD-INVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLL 465
            :.::.|. |::.|:|.:.|.::|.|:|| :..:|.|.:....:....||.|||:...|:|:..||
 Worm   345 MNAMDPMNKMKKLRDMEFLDKIDIETADNVQSQMFDLQGSTTSVRYTGHGGPVFSVNFSPDRRLL 409

  Fly   466 LSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVF 530
            :|.:.|.|:||||:.|....|.||.... ||..:|...||||.:.|.||||.:|:||....||:|
 Worm   410 ISSAGDRTVRLWSMETQRNAVIYRTPAV-VWQAQFCSRGYYFATASADKTAAMWSTDRMHPLRIF 473

  Fly   531 VGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGS 595
            .....||.|:.:|||.||:|.||.||.||:||..:|..||:.:|||.|:.::.||.||||:.|..
 Worm   474 ADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKASIIAVKFSPCGRYIVSLD 538

  Fly   596 VDHNIIIWDLSNGSLVTT-LLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHI 659
            ...|::||||:...||.. :.....|..:|||||||.|.|.:..::::.|:....:....::...
 Worm   539 AIGNLMIWDLAYQRLVAAEITEQAGTKGSITFSRDGGVFAVSHGNSSIQLYSLDTLIGTVLAAGQ 603

  Fly   660 TVSHHQDENDEDVYLMRTFPSKNSPFVSLHFTRRNLLMCVGLF 702
            ..|:.:.:.:.|.:.:.::.:|.:..:.|||||||||:..|.|
 Worm   604 NDSYIEPKVNLDGFNIGSYATKETAVIGLHFTRRNLLLGFGCF 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf5NP_476957.1 TAF5_NTD2 114..245 CDD:176269 31/136 (23%)
WD40 319..674 CDD:225201 127/357 (36%)
WD40 373..646 CDD:238121 109/275 (40%)
WD40 repeat 380..448 CDD:293791 20/69 (29%)
WD40 repeat 454..490 CDD:293791 14/35 (40%)
WD40 repeat 495..531 CDD:293791 17/35 (49%)
WD40 repeat 538..573 CDD:293791 18/34 (53%)
WD40 repeat 579..615 CDD:293791 14/36 (39%)
taf-5NP_492169.2 TAF5_NTD2 79..207 CDD:176269 34/148 (23%)
WD40 <311..548 CDD:225201 96/237 (41%)
WD40 repeat 323..392 CDD:293791 19/68 (28%)
WD40 390..>593 CDD:238121 87/203 (43%)
WD40 repeat 397..432 CDD:293791 14/34 (41%)
WD40 repeat 439..474 CDD:293791 16/34 (47%)
WD40 repeat 480..516 CDD:293791 19/35 (54%)
WD40 repeat 522..554 CDD:293791 12/31 (39%)
WD40 repeat 561..589 CDD:293791 10/27 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167926
Domainoid 1 1.000 43 1.000 Domainoid score I8401
eggNOG 1 0.900 - - E2759_KOG0263
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5064
Inparanoid 1 1.050 301 1.000 Inparanoid score I1622
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52000
OrthoDB 1 1.010 - - D230914at33208
OrthoFinder 1 1.000 - - FOG0003655
OrthoInspector 1 1.000 - - otm14181
orthoMCL 1 0.900 - - OOG6_102926
Panther 1 1.100 - - LDO PTHR19879
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1472
SonicParanoid 1 1.000 - - X3022
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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